Factsheet for Zm00001d033254_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93762	Sorghum	plastid	88.11	84.94
EER91181	Sorghum	plastid	90.91	84.6
Zm00001d000203_P001	Maize	cytosol	87.18	84.04
Zm00001d033256_P001	Maize	cytosol	84.62	81.94
TraesCSU01G072800.1	Wheat	cytosol	79.95	77.95
TraesCS5D01G385900.1	Wheat	cytosol	80.42	77.88
Os03t0640000-00	Rice	cytosol	79.25	77.1
HORVU5Hr1G093250.4	Barley	cytosol	79.95	76.22
TraesCS5B01G379300.1	Wheat	plastid	80.19	70.93
Zm00001d041481_P001	Maize	cytosol	72.73	68.72
GSMUA_Achr8P07160_001	Banana	cytosol	45.69	51.85
Zm00001d031053_P001	Maize	plastid	67.37	51.7
Zm00001d034340_P001	Maize	cytosol	51.98	50.91
GSMUA_Achr2P01360_001	Banana	cytosol	46.15	49.62
GSMUA_Achr11P...	Banana	cytosol	32.17	49.29
GSMUA_Achr5P26630_001	Banana	cytosol	39.39	48.99
Zm00001d014386_P001	Maize	cytosol, plastid	45.69	48.04
KRH36757	Soybean	cytosol	47.32	46.77
KRH11757	Soybean	cytosol	47.09	46.76
Zm00001d018788_P001	Maize	nucleus	49.65	45.71
VIT_10s0092g00150.t01	Wine grape	cytosol	45.22	45.43
PGSC0003DMT400021555	Potato	cytosol	43.82	43.22
Solyc10g080690.1.1	Tomato	cytosol	43.36	43.06
PGSC0003DMT400060932	Potato	cytosol	42.89	42.89
Zm00001d028482_P001	Maize	cytosol	45.92	42.83
Solyc10g078530.1.1	Tomato	cytosol	43.36	42.76
Zm00001d029412_P001	Maize	mitochondrion	24.71	24.77
Zm00001d005911_P001	Maize	cytosol	22.14	23.63
Zm00001d031811_P001	Maize	plastid	23.54	23.17
Zm00001d031813_P001	Maize	extracellular	22.84	22.53
Zm00001d042504_P002	Maize	cytosol	21.21	21.62
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	20.51	21.46
Zm00001d031815_P001	Maize	cytosol	21.91	21.41
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	20.28	21.38
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	20.28	21.38
Zm00001d007618_P001	Maize	mitochondrion	20.28	21.38
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	20.28	21.38
Zm00001d042041_P001	Maize	cytosol	18.65	21.11
Zm00001d007623_P002	Maize	mitochondrion	20.51	21.05
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	19.35	19.71
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	22.61	19.06

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1D6KX88	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:IPR002641	ProteinID:ONM07073.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241
PANTHER:PTHR32241:SF4	SUPFAM:SSF52151	UniParc:UPI000842B00D	EnsemblPlantsGene:Zm00001d033254	EnsemblPlants:Zm00001d033254_P001	EnsemblPlants:Zm00001d033254_T001
SEG:seg	:	:	:	:	:

Description

Patatin-like protein 6

Coordinates

chr1:+:256163181..256164470

Molecular Weight (calculated)

44145.6 Da

IEP (calculated)

9.403

GRAVY (calculated)

0.030

Length

429 amino acids

Sequence
(BLAST)

001: MASPPTKGMG VDKLSYEIFS LLERTFLLGP GTPPRALLDG GRVRVLAIDG CGAGAEDALL AAAALARLEA GLRDRTGDPD ARVADFFDLA AGAGAGGVLA
101: AMLFLRGADG RPRYTANEAL AFVAGSIGGK GWGGRRRGPW AKLFRGAARG GDRSFFRSAF GDATLRDTVA PLLVPCHDLA TAAPFVFSRA DAVESDSFDF
201: RLRDVCAATC AAGGALASVR SVDGATAIAA ASGGVAAMGN PAAAAITHVL HNKQEFPLAT GVQDLLVLSI GAGASATVCD GSSTPMPARS PSPRELARVT
301: AEGVADMVDE SVAMAFGDAC GCKYVRIQAR KAPAPLHAAA GAMLAQRSVE SVLFRGRRLS ERTNAEKVDA LAAELVKEQE RRRHSPLPNV AIKQVATPRL
401: SSATTTSSGT ATARTASTMP SPASWDSRR

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.