Factsheet for TraesCSU01G072800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385900.1	Wheat	cytosol	99.09	98.42
HORVU5Hr1G093250.4	Barley	cytosol	97.73	95.56
TraesCS5B01G379300.1	Wheat	plastid	98.86	89.69
Zm00001d033254_P001	Maize	cytosol	77.95	79.95
Os03t0640000-00	Rice	cytosol	79.55	79.37
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.77	75.81
EER91181	Sorghum	plastid	79.32	75.7
EER93762	Sorghum	plastid	76.36	75.51
Zm00001d000203_P001	Maize	cytosol	76.36	75.51
Zm00001d033256_P001	Maize	cytosol	75.0	74.49
GSMUA_Achr8P07160_001	Banana	cytosol	44.32	51.59
GSMUA_Achr11P...	Banana	cytosol	31.14	48.93
GSMUA_Achr2P01360_001	Banana	cytosol	43.64	48.12
GSMUA_Achr5P26630_001	Banana	cytosol	37.73	48.12
VIT_10s0092g00150.t01	Wine grape	cytosol	45.0	46.37
KRH36757	Soybean	cytosol	44.77	45.39
KRH11757	Soybean	cytosol	44.55	45.37
PGSC0003DMT400021555	Potato	cytosol	43.86	44.37
PGSC0003DMT400060932	Potato	cytosol	43.18	44.29
Solyc10g080690.1.1	Tomato	cytosol	43.41	44.21
Solyc10g078530.1.1	Tomato	cytosol	43.18	43.68

Protein Annotations

EnsemblPlants:TraesCSU01G072800.1	EnsemblPlantsGene:TraesCSU01G072800	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFAM:PF01734
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.4	:	:

Description

No Description!

Coordinates

chrUn:+:63674823..63677199

Molecular Weight (calculated)

45276.6 Da

IEP (calculated)

8.374

GRAVY (calculated)

0.027

Length

440 amino acids

Sequence
(BLAST)

001: MASPIPMDVD KLSYEIFALL ESKFLFGAGG AGCLSGPGTP FRGANDGRVR VLAVDGCGAG AGDALLAAAA LARLEAGLRQ RAGDPDARVA DFFDVAAGAG
101: AGGVLAAMLF LKGADGRPRY TAEEALAFVA GSVGKDWGGR RRGWTKLFRG GARKAERSFR RVFGDATLRD TVAPVLVPCY DLATGAPFMF SRADAVESDS
201: FDFRLTDVCA ATCAAAGAAA AVRSVDGRTA IAAASGAVAA MGNPASAAIT HVLHNKQEFP LAVSMDDILV LSIGTGASSS AASCGNGWST PMPTRSPSRD
301: ELARVTAQGV ADMVDEAVAM AFGHASDSNY VRLQASNALN SPHTQTAGAA AGAMLSQRNV ESVLFRGRRL SDRTNAEKVD ALAAELVKEQ ERRMGSPLPN
401: VVIKQVASPR LSSATTASSV TATVRTASTM PSPASWDSRQ

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.