Factsheet for TraesCS5D01G385900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G072800.1	Wheat	cytosol	98.42	99.09
HORVU5Hr1G093250.4	Barley	cytosol	98.19	96.67
TraesCS5B01G379300.1	Wheat	plastid	98.87	90.31
Zm00001d033254_P001	Maize	cytosol	77.88	80.42
Os03t0640000-00	Rice	cytosol	79.68	80.05
EER93762	Sorghum	plastid	76.75	76.4
EER91181	Sorghum	plastid	79.46	76.36
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.72	76.27
Zm00001d000203_P001	Maize	cytosol	76.3	75.96
Zm00001d033256_P001	Maize	cytosol	75.62	75.62
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	71.11	65.62
TraesCS5D01G430400.1	Wheat	cytosol	48.98	55.22
GSMUA_Achr8P07160_001	Banana	cytosol	44.47	52.12
GSMUA_Achr11P...	Banana	cytosol	30.93	48.93
GSMUA_Achr2P01360_001	Banana	cytosol	43.79	48.62
GSMUA_Achr5P26630_001	Banana	cytosol	37.7	48.41
TraesCS5D01G430300.1	Wheat	plastid	51.02	47.08
VIT_10s0092g00150.t01	Wine grape	cytosol	44.92	46.6
KRH36757	Soybean	cytosol	44.7	45.62
KRH11757	Soybean	cytosol	44.47	45.6
TraesCS7D01G452000.1	Wheat	cytosol	43.12	45.58
PGSC0003DMT400060932	Potato	cytosol	43.12	44.52
Solyc10g080690.1.1	Tomato	cytosol	43.34	44.44
PGSC0003DMT400021555	Potato	cytosol	43.57	44.37
Solyc10g078530.1.1	Tomato	cytosol	42.89	43.68
TraesCS4D01G221300.1	Wheat	cytosol	43.79	42.27
TraesCS5D01G249800.1	Wheat	cytosol	22.12	24.2
TraesCS7D01G491300.1	Wheat	plastid	14.0	24.12
TraesCS5D01G528100.1	Wheat	cytosol	20.77	23.47
TraesCS4D01G284700.1	Wheat	mitochondrion	22.12	23.22
TraesCS7D01G491900.1	Wheat	plastid	21.67	22.75
TraesCS7D01G178600.1	Wheat	cytosol	20.77	22.55
TraesCS1D01G302900.1	Wheat	cytosol	20.54	22.47
TraesCS1D01G060500.1	Wheat	cytosol	20.77	22.38
TraesCS7D01G034300.1	Wheat	mitochondrion	20.54	22.03
TraesCS4D01G285300.1	Wheat	plastid	21.44	21.94
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	19.64	21.75
TraesCS2D01G166800.1	Wheat	cytosol	19.64	21.43
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	20.09	21.09
TraesCS3D01G033500.1	Wheat	plastid	20.54	21.02
TraesCS3D01G033200.1	Wheat	plastid	20.54	21.02
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	19.64	19.38
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	11.29	16.56

Protein Annotations

EnsemblPlants:TraesCS5D01G385900.1	EnsemblPlantsGene:TraesCS5D01G385900	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFAM:PF01734
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.4	:	:

Description

No Description!

Coordinates

chr5D:+:455614202..455615533

Molecular Weight (calculated)

45708.2 Da

IEP (calculated)

8.374

GRAVY (calculated)

0.024

Length

443 amino acids

Sequence
(BLAST)

001: MEAMASPIPM DVDKLSYEIF ALLESKFLFG AGGAGCLSGP GTPFRGANDG RVRVLAVDGC GAGAGDALLA AAALARLEAG LRQRAGDPDA RVADFFDVAA
101: GAGAGGVLAA MLFLKGADGR PRYTAEEALA FVAGSVGKDW GGRRRGWTKL FRGGARKAER SFRRVFGDAT LRDTVAPVLV PCYDLATGAP FMFSRADAVE
201: SDSFDFRLTD VCAATCAAAG AAAAVRSVDG RTAIAAASGA VAAMGNPASA AITHVLHNKQ EFPLAVSMDD ILVLSIGTGA SSSAATCGNG WSTPMPTRSP
301: SRDELARVTA QGVADMVDEA VAMAFGHASD SNYVRLQASS ALNSPHTQTA GAAAGAMLSQ RNVESVLFRG RRLSERTNAE KVDALAAELV KEQERRMRSP
401: LPNVVIKQVA SPRLSSATTA SSVTATVRTA STMPSPASWD SRQ

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.