Factsheet for TraesCS6D01G007000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G004800.1	Wheat	cytosol	92.65	92.65
TraesCS6B01G009800.1	Wheat	cytosol	89.75	90.16
HORVU6Hr1G001990.1	Barley	cytosol	85.75	85.56
TraesCS7D01G178600.1	Wheat	cytosol	39.87	43.87
TraesCS1D01G060500.1	Wheat	cytosol	39.64	43.31
TraesCS1D01G302900.1	Wheat	cytosol	38.75	42.96
TraesCS7D01G491300.1	Wheat	plastid	21.38	37.35
TraesCS7D01G034300.1	Wheat	mitochondrion	33.85	36.8
TraesCS7D01G491900.1	Wheat	plastid	34.08	36.26
TraesCS5D01G249800.1	Wheat	cytosol	32.52	36.05
TraesCS4D01G285300.1	Wheat	plastid	34.74	36.03
TraesCS4D01G284700.1	Wheat	mitochondrion	33.41	35.55
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	33.18	35.31
TraesCS5D01G528100.1	Wheat	cytosol	30.73	35.2
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	39.42	34.77
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	30.96	34.75
TraesCS3D01G033500.1	Wheat	plastid	33.41	34.64
TraesCS3D01G033200.1	Wheat	plastid	33.41	34.64
TraesCS2D01G166800.1	Wheat	cytosol	31.18	34.48
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	20.94	31.13
EES10271	Sorghum	cytosol	24.28	30.97
TraesCS5D01G430400.1	Wheat	cytosol	20.49	23.41
TraesCS4D01G221300.1	Wheat	cytosol	21.83	21.35
TraesCS7D01G452000.1	Wheat	cytosol	18.93	20.29
TraesCS5D01G430300.1	Wheat	plastid	21.38	20.0
TraesCS5D01G385900.1	Wheat	cytosol	19.38	19.64
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	19.82	18.54

Protein Annotations

EnsemblPlants:TraesCS6D01G007000.1	EnsemblPlantsGene:TraesCS6D01G007000	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	ncoils:Coil	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10
PFAM:PF01734	PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.3	:

Description

No Description!

Coordinates

chr6D:+:2919479..2921341

Molecular Weight (calculated)

49944.5 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.319

Length

449 amino acids

Sequence
(BLAST)

001: MASNKDAELE TPLLMPEEEE GGPTAPLLEQ GSPEPTPRPR LPPPKFGELI TVLSIDGGGI HGLIPTVVLK CLEEKLQAID GEDARIADYF DVIAGMSAGA
101: IIVTMLAAPN TNNRTKYTPQ EIQDFYVKNG PNMFPSKRWW RWPLDLLSAS WGPKYDVTFL QKNKTKEVTG EHTLSKLAAP TFDANILEPL IFSSFQDAVQ
201: NLVEEAGPDL PDVCIGPPST ATPTYFPAHY FDIWVSDMEQ SKYHLIDGGN NPTMAAISKI TREQLLMNPA FHPSGVDYMK YLVISVGAGC AVHENVPAKR
301: GAFNWFHSRR NSHSPVTDTS SHASAVLADW RVRMLLHNGN CVRKQNYLYI QALAPLLGEA ILPMDNATSK NMADLLDIGY KLLAEKVAMV DLTTGKYETV
401: EDENAPTNDA ELQRFSELLV VERHLRLKEQ QRQRQEEEQN GVHLLNIIE

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.