Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G529100.1 | Wheat | cytosol | 98.98 | 98.98 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 95.92 | 95.92 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 92.09 | 93.52 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 51.02 | 93.46 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 83.16 | 81.5 |
| TraesCS2D01G166800.1 | Wheat | cytosol | 72.96 | 70.44 |
| OQU80645 | Sorghum | cytosol | 69.9 | 68.33 |
| Os08t0477500-01 | Rice | plasma membrane | 43.37 | 63.2 |
| Zm00001d031815_P001 | Maize | cytosol | 70.15 | 62.64 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 32.91 | 60.56 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 63.27 | 58.91 |
| Solyc04g079220.1.1 | Tomato | cytosol | 10.46 | 54.67 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 30.87 | 53.78 |
| OQU80643 | Sorghum | cytosol | 67.35 | 53.66 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 50.26 | 52.67 |
| TraesCS7D01G491300.1 | Wheat | plastid | 32.91 | 50.19 |
| TraesCS5D01G249800.1 | Wheat | cytosol | 51.79 | 50.12 |
| TraesCS4D01G284700.1 | Wheat | mitochondrion | 51.02 | 47.39 |
| Solyc02g065090.2.1 | Tomato | nucleus | 50.77 | 47.38 |
| TraesCS7D01G178600.1 | Wheat | cytosol | 49.23 | 47.3 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 49.49 | 47.2 |
| TraesCS1D01G302900.1 | Wheat | cytosol | 48.72 | 47.16 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 50.26 | 46.9 |
| TraesCS7D01G491200.1 | Wheat | mitochondrion, plastid | 50.26 | 46.68 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 48.72 | 46.59 |
| TraesCS7D01G491900.1 | Wheat | plastid | 50.0 | 46.45 |
| TraesCS3D01G033500.1 | Wheat | plastid | 51.02 | 46.19 |
| TraesCS3D01G033200.1 | Wheat | plastid | 51.02 | 46.19 |
| TraesCS7D01G034300.1 | Wheat | mitochondrion | 48.47 | 46.0 |
| TraesCS1D01G060500.1 | Wheat | cytosol | 48.21 | 45.99 |
| TraesCS4D01G285300.1 | Wheat | plastid | 50.77 | 45.96 |
| Solyc02g090490.2.1 | Tomato | extracellular | 48.21 | 45.87 |
| PGSC0003DMT400025955 | Potato | extracellular | 47.7 | 45.39 |
| PGSC0003DMT400002016 | Potato | cytosol | 29.08 | 44.19 |
| Solyc04g079210.2.1 | Tomato | cytosol | 17.09 | 41.36 |
| TraesCS3D01G033600.1 | Wheat | mitochondrion, peroxisome | 31.12 | 40.4 |
| PGSC0003DMT400058995 | Potato | cytosol | 16.33 | 40.0 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 15.82 | 38.27 |
| TraesCS6D01G007000.1 | Wheat | cytosol, peroxisome, plastid | 35.2 | 30.73 |
| TraesCS5D01G430400.1 | Wheat | cytosol | 25.51 | 25.45 |
| TraesCS4D01G221300.1 | Wheat | cytosol | 25.51 | 21.79 |
| TraesCS5D01G430300.1 | Wheat | plastid | 26.28 | 21.46 |
| TraesCS7D01G452000.1 | Wheat | cytosol | 22.7 | 21.24 |
| TraesCS5D01G385900.1 | Wheat | cytosol | 23.47 | 20.77 |
| TraesCS5D01G057600.1 | Wheat | cytosol, peroxisome, plastid | 23.98 | 19.58 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G528100.1 | EnsemblPlantsGene:TraesCS5D01G528100 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF7 | PFAM:PF01734 |
| PFscan:PS51635 | SUPFAM:SSF52151 | MapMan:5.7.2.2.3 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:545145447..545147179
Molecular Weight (calculated)
41651.8 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.071
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGSAAEG DKSKVVTILS IDGGGVRGII PATVLAFLEK ELQKLDGPDA RIADYFDVVA GTSTGGLLTV MLAAPDKDGR PLFDAKDLAK FYIDESPKIF
101: PQNCRGSIFS KIGSALALAT GPKYDGKYLH SLLRRHLGDT KLDGALTHVV IPAFDIAYLQ PTIFSSFQLE NQPAKNALLS DIAIGTSAAP TFFPAHYFET
201: NDGKGGTRAF NLIDGAVAAN NPTLLAMNQV AEHMVLAGQQ PAGKSYIVIS IGCGTSSLPK LKYSAKDAAK WGVLSWLIKD GSVPILDMFN AGSADMVDFH
301: LSVLSAVLGS SHQYLRIQYD KLSGSAGSID DCSKANLDKL VKIGEELLSE KVSGVDLETG RNVEVPGGGT NAEELAKYAR QLSDERRRRR NN
101: PQNCRGSIFS KIGSALALAT GPKYDGKYLH SLLRRHLGDT KLDGALTHVV IPAFDIAYLQ PTIFSSFQLE NQPAKNALLS DIAIGTSAAP TFFPAHYFET
201: NDGKGGTRAF NLIDGAVAAN NPTLLAMNQV AEHMVLAGQQ PAGKSYIVIS IGCGTSSLPK LKYSAKDAAK WGVLSWLIKD GSVPILDMFN AGSADMVDFH
301: LSVLSAVLGS SHQYLRIQYD KLSGSAGSID DCSKANLDKL VKIGEELLSE KVSGVDLETG RNVEVPGGGT NAEELAKYAR QLSDERRRRR NN
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.