Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22313117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g090490.2.1 | Tomato | extracellular | 96.84 | 96.84 |
| PGSC0003DMT400058995 | Potato | cytosol | 29.37 | 75.62 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 73.3 | 71.9 |
| PGSC0003DMT400002016 | Potato | cytosol | 44.9 | 71.71 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 35.19 | 68.08 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 60.44 | 66.58 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 24.51 | 62.35 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 30.34 | 55.56 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 56.07 | 54.48 |
| PGSC0003DMT400040781 | Potato | cytosol | 52.67 | 54.39 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 31.31 | 54.2 |
| TraesCS7D01G034300.1 | Wheat | mitochondrion | 54.13 | 54.0 |
| Os08t0376500-00 | Rice | plastid | 33.98 | 53.85 |
| KXG25325 | Sorghum | plastid | 57.04 | 53.78 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 55.34 | 53.77 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.18 | 53.22 |
| Os08t0477100-01 | Rice | plastid | 55.58 | 53.13 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 54.61 | 53.07 |
| TraesCS4B01G286600.1 | Wheat | plastid | 55.58 | 52.89 |
| TraesCS4D01G285300.1 | Wheat | plastid | 55.34 | 52.66 |
| TraesCS7D01G491200.1 | Wheat | mitochondrion, plastid | 53.88 | 52.61 |
| TraesCS3B01G036100.1 | Wheat | cytosol | 34.71 | 52.57 |
| TraesCS7B01G411300.1 | Wheat | mitochondrion | 53.4 | 52.51 |
| HORVU7Hr1G113030.2 | Barley | plastid | 33.25 | 52.49 |
| TraesCS4A01G017400.1 | Wheat | plastid | 55.1 | 52.42 |
| TraesCS7A01G504100.1 | Wheat | plastid | 53.64 | 52.37 |
| TraesCS7B01G411200.1 | Wheat | plastid | 53.64 | 52.37 |
| TraesCS3D01G033500.1 | Wheat | plastid | 54.85 | 52.19 |
| TraesCS3D01G033200.1 | Wheat | plastid | 54.85 | 52.19 |
| HORVU4Hr1G075070.7 | Barley | plastid | 55.1 | 52.18 |
| TraesCS7D01G491900.1 | Wheat | plastid | 53.4 | 52.13 |
| Os08t0476900-01 | Rice | plastid | 54.37 | 52.09 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 41.5 | 51.98 |
| TraesCS3A01G046500.1 | Wheat | plastid | 54.61 | 51.96 |
| Zm00001d031811_P001 | Maize | plastid | 54.85 | 51.83 |
| TraesCS7D01G491300.1 | Wheat | plastid | 32.28 | 51.75 |
| Os08t0477500-01 | Rice | plasma membrane | 33.74 | 51.67 |
| TraesCS7B01G411800.1 | Wheat | plastid | 53.64 | 51.64 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 32.28 | 51.55 |
| EES15134 | Sorghum | plastid | 54.37 | 51.49 |
| TraesCS3B01G036800.1 | Wheat | plastid | 54.13 | 51.38 |
| TraesCS6B01G170200.1 | Wheat | plastid | 52.91 | 51.29 |
| Zm00001d031813_P001 | Maize | extracellular | 54.13 | 51.26 |
| OQU80645 | Sorghum | cytosol | 49.51 | 50.87 |
| TraesCS7A01G504700.1 | Wheat | plastid | 51.7 | 50.47 |
| TraesCS2B01G185200.1 | Wheat | cytosol | 49.51 | 50.12 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 50.24 | 50.12 |
| TraesCS2D01G166800.1 | Wheat | cytosol | 49.03 | 49.75 |
| TraesCS3D01G033600.1 | Wheat | mitochondrion, peroxisome | 36.41 | 49.67 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 25.73 | 49.53 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 48.54 | 49.26 |
| PGSC0003DMT400044057 | Potato | cytosol | 11.41 | 48.96 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 45.63 | 48.7 |
| TraesCS5B01G529000.1 | Wheat | cytosol | 46.36 | 48.11 |
| HORVU5Hr1G119820.1 | Barley | plastid | 46.36 | 48.11 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 48.06 | 48.06 |
| TraesCS5B01G529100.1 | Wheat | cytosol | 45.63 | 47.96 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 33.74 | 47.93 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 46.36 | 47.75 |
| TraesCS5D01G528100.1 | Wheat | cytosol | 45.39 | 47.7 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 54.85 | 47.08 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 44.66 | 46.94 |
| Zm00001d031815_P001 | Maize | cytosol | 50.0 | 46.92 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 53.16 | 46.9 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 47.09 | 46.08 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 44.42 | 45.52 |
| PGSC0003DMT400022567 | Potato | extracellular | 38.11 | 45.11 |
| PGSC0003DMT400044055 | Potato | cytosol | 39.81 | 45.05 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 37.38 | 44.9 |
| Os08t0376550-00 | Rice | cytosol | 19.66 | 44.75 |
| PGSC0003DMT400044046 | Potato | cytosol | 29.85 | 44.73 |
| PGSC0003DMT400040802 | Potato | mitochondrion | 15.78 | 43.33 |
| TraesCS3B01G036500.1 | Wheat | plastid | 45.15 | 41.89 |
| OQU80643 | Sorghum | cytosol | 49.51 | 41.46 |
| PGSC0003DMT400036586 | Potato | cytosol | 22.33 | 39.66 |
| PGSC0003DMT400060317 | Potato | cytosol | 31.55 | 27.9 |
| OQU83677 | Sorghum | cytosol | 22.09 | 27.33 |
| PGSC0003DMT400060932 | Potato | cytosol | 27.67 | 26.57 |
| PGSC0003DMT400021555 | Potato | cytosol | 27.43 | 25.98 |
| PGSC0003DMT400033524 | Potato | cytosol | 23.3 | 25.33 |
| PGSC0003DMT400051868 | Potato | cytosol | 23.06 | 24.87 |
Protein Annotations
| EntrezGene:102589148 | Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 |
| InterPro:IPR002641 | UniProt:M1AME5 | PFAM:PF01734 | EnsemblPlantsGene:PGSC0003DMG400010022 | PGSC:PGSC0003DMG400010022 | EnsemblPlants:PGSC0003DMT400025955 |
| InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0002968472 | RefSeq:XP_006338216.1 | : | : | : |
Description
Patatin 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400010022]
Coordinates
chr2:+:44264700..44266770
Molecular Weight (calculated)
45009.5 Da
IEP (calculated)
8.861
GRAVY (calculated)
-0.079
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRMVLIAAA MTLFVTLQVL QAPLMVSAAT KGKTVTILSI DGGGIRGVIP GTLLAFLESK LQELDGPNAR LADYFDVVAG TSTGGLVTTM LTAPNKDNRP
101: LYQAKDISNF YMEHGPQIFP QSRRNSFVRR VTNLFGGPKY DGIYLRTIIN SILGNITMKQ TLTNTVIPTF DIKRLQPIIF STADAKANIS KNAQLSDVCL
201: STSAAPTYFP VHSFETKDAQ GKPRTFDLVD GGVAANNPTL MAITYVSKQI MTGNFQYEGM KNMDCKKMLV LSLGTGIGKQ EEKYNATVAS RWGMLGWVYN
301: NGATPLIDIY GDASADMVDI HVSTMFQTLG SEKNYIRIQD DNLTGEAASM DIATTKNMET LVQIGNDLLK KPISRVNLET GRYEPVVGEG TNEAAIVRFA
401: QLLSEERKLR IN
101: LYQAKDISNF YMEHGPQIFP QSRRNSFVRR VTNLFGGPKY DGIYLRTIIN SILGNITMKQ TLTNTVIPTF DIKRLQPIIF STADAKANIS KNAQLSDVCL
201: STSAAPTYFP VHSFETKDAQ GKPRTFDLVD GGVAANNPTL MAITYVSKQI MTGNFQYEGM KNMDCKKMLV LSLGTGIGKQ EEKYNATVAS RWGMLGWVYN
301: NGATPLIDIY GDASADMVDI HVSTMFQTLG SEKNYIRIQD DNLTGEAASM DIATTKNMET LVQIGNDLLK KPISRVNLET GRYEPVVGEG TNEAAIVRFA
401: QLLSEERKLR IN
001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
Arabidopsis Description
PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.