Factsheet for TraesCS4A01G017400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G285300.1	Wheat	plastid	98.15	98.15
TraesCS4B01G286600.1	Wheat	plastid	96.77	96.77
HORVU4Hr1G075070.7	Barley	plastid	96.77	96.32
TraesCS6A01G142200.1	Wheat	cytosol	60.28	79.33
KXG25325	Sorghum	plastid	79.68	78.95
TraesCS3A01G046500.1	Wheat	plastid	78.52	78.52
TraesCS4A01G449600.1	Wheat	mitochondrion	75.98	77.59
Zm00001d031811_P001	Maize	plastid	78.06	77.52
TraesCS4A01G450400.1	Wheat	mitochondrion	75.75	77.36
Os08t0476900-01	Rice	plastid	76.21	76.74
TraesCS7A01G038300.1	Wheat	mitochondrion	75.06	76.65
TraesCS7A01G504100.1	Wheat	plastid	73.9	75.83
EES15134	Sorghum	plastid	75.75	75.4
Os08t0477100-01	Rice	plastid	74.6	74.94
Zm00001d031813_P001	Maize	extracellular	74.6	74.25
Os08t0376500-00	Rice	plastid	43.88	73.08
TraesCS7A01G504700.1	Wheat	plastid	70.67	72.51
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	65.59	70.3
TraesCS7A01G504200.1	Wheat	mitochondrion	66.74	69.98
Os08t0376550-00	Rice	cytosol	28.87	69.06
VIT_00s0567g00050.t01	Wine grape	cytosol	32.1	65.26
KRH61261	Soybean	cytosol, peroxisome, plastid	32.79	63.11
VIT_00s0567g00060.t01	Wine grape	cytosol	54.5	63.1
TraesCS7A01G177300.1	Wheat	cytosol	54.04	57.35
TraesCS1A01G407900.1	Wheat	cytosol	31.41	57.14
TraesCS5A01G243200.1	Wheat	cytosol	53.12	56.79
TraesCS1A01G059100.1	Wheat	cytosol	53.58	56.72
TraesCS1A01G303400.1	Wheat	cytosol	53.12	56.65
Solyc02g090490.2.1	Tomato	extracellular	52.42	55.1
PGSC0003DMT400025955	Potato	extracellular	52.42	55.1
Solyc04g079220.1.1	Tomato	cytosol	9.47	54.67
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	51.27	54.15
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	51.04	53.77
PGSC0003DMT400002016	Potato	cytosol	31.87	53.49
PGSC0003DMT400002019	Potato	golgi, vacuole	51.27	52.86
Solyc04g079210.2.1	Tomato	cytosol	19.63	52.47
VIT_00s0567g00040.t01	Wine grape	cytosol	19.63	52.47
TraesCS2A01G159600.1	Wheat	cytosol	49.19	52.46
Solyc02g065090.2.1	Tomato	nucleus	50.81	52.38
PGSC0003DMT400058995	Potato	cytosol	19.17	51.88
TraesCS4A01G018100.1	Wheat	cytosol	50.35	51.66
TraesCS1A01G407800.2	Wheat	cytosol	45.73	50.51
TraesCS4A01G345400.1	Wheat	cytosol	24.71	50.0
TraesCS4A01G345300.1	Wheat	cytosol	44.57	48.01
TraesCS6A01G004800.1	Wheat	cytosol	35.8	34.52
TraesCS7A01G012900.1	Wheat	cytosol	38.34	30.24
TraesCS7A01G464400.1	Wheat	cytosol	23.33	24.69
TraesCS4A01G083200.1	Wheat	cytosol	25.4	23.81
TraesCS5A01G422200.1	Wheat	cytosol	21.71	23.56
TraesCS5A01G422000.1	Wheat	cytosol	22.63	22.22
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	22.17	19.88

Protein Annotations

EnsemblPlants:TraesCS4A01G017400.1	EnsemblPlantsGene:TraesCS4A01G017400	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF14	PFAM:PF01734
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	TIGR:cd07214	MapMan:5.7.2.2.3	:

Description

No Description!

Coordinates

chr4A:-:11676825..11678425

Molecular Weight (calculated)

46696.9 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.153

Length

433 amino acids

Sequence
(BLAST)

001: MSPVHVPELS SGGSGSGSLT LNPVQRALSR LSSSSALTPR SPPPSYGSIV TVLSIDGGGV RGIIPGTILA FLEEKLQELD GPDVRIADYF DVIAGTSTGG
101: LVTAMLTAPD AKGRPLFAAK DINNFYLEHC PKIFPAGYGG PLGLLRSMRG PKYDGQYLHS VVKELLGETR VGEALQNIVI PTFDIKLLQP TIFSRYDARN
201: DVSKNALLSD VCISTSAAPT YLPGHHFETK DKDGRPRAFN LIDGGVAANN PTMLAMTDVS KQILLGNQDF FPIKPADYGK FMVLSLGTGS AKVEEKFDAA
301: ACSKWGILGW LYNHGATPLI DSFSQASADL VDIQASVLFQ ALRCEKRYLR IQDDELKGDT SSVDVSTPEN LNRLVEVGKA LLKRSVCRVN VETGKTVPDD
401: NRGTNEEELI GFAHMLSQER KARLQKKGVT ITQ

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.