Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 6
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025955 | Potato | extracellular | 96.84 | 96.84 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 74.51 | 74.88 |
| Solyc02g065090.2.1 | Tomato | nucleus | 73.54 | 72.14 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 71.12 | 71.29 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 36.41 | 70.42 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 60.92 | 67.11 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 23.79 | 60.49 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 32.04 | 55.46 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 56.07 | 54.48 |
| Os08t0376500-00 | Rice | plastid | 34.22 | 54.23 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 29.61 | 54.22 |
| TraesCS7D01G034300.1 | Wheat | mitochondrion | 54.13 | 54.0 |
| Solyc02g090630.2.1 | Tomato | cytosol | 51.7 | 53.92 |
| Os08t0477100-01 | Rice | plastid | 56.31 | 53.83 |
| Solyc04g079250.2.1 | Tomato | cytosol | 52.91 | 53.83 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 55.34 | 53.77 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.67 | 53.71 |
| HORVU7Hr1G113030.2 | Barley | plastid | 33.98 | 53.64 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 55.1 | 53.54 |
| Solyc04g079240.2.1 | Tomato | nucleus | 53.4 | 53.4 |
| KXG25325 | Sorghum | plastid | 56.55 | 53.32 |
| Solyc04g079260.2.1 | Tomato | cytosol | 52.43 | 53.2 |
| TraesCS7D01G491300.1 | Wheat | plastid | 33.01 | 52.92 |
| TraesCS4B01G286600.1 | Wheat | plastid | 55.58 | 52.89 |
| TraesCS7D01G491200.1 | Wheat | mitochondrion, plastid | 54.13 | 52.84 |
| Os08t0477500-01 | Rice | plasma membrane | 34.47 | 52.79 |
| TraesCS7B01G411300.1 | Wheat | mitochondrion | 53.64 | 52.74 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 33.01 | 52.71 |
| TraesCS3D01G033500.1 | Wheat | plastid | 55.34 | 52.66 |
| TraesCS3D01G033200.1 | Wheat | plastid | 55.34 | 52.66 |
| TraesCS4D01G285300.1 | Wheat | plastid | 55.34 | 52.66 |
| TraesCS7B01G411200.1 | Wheat | plastid | 53.88 | 52.61 |
| TraesCS7D01G491900.1 | Wheat | plastid | 53.88 | 52.61 |
| TraesCS7A01G504100.1 | Wheat | plastid | 53.88 | 52.61 |
| TraesCS4A01G017400.1 | Wheat | plastid | 55.1 | 52.42 |
| TraesCS3B01G036100.1 | Wheat | cytosol | 34.47 | 52.21 |
| TraesCS3A01G046500.1 | Wheat | plastid | 54.85 | 52.19 |
| OQU80645 | Sorghum | cytosol | 50.73 | 52.12 |
| TraesCS7B01G411800.1 | Wheat | plastid | 54.13 | 52.1 |
| Solyc04g079220.1.1 | Tomato | cytosol | 9.47 | 52.0 |
| HORVU4Hr1G075070.7 | Barley | plastid | 54.85 | 51.95 |
| Os08t0476900-01 | Rice | plastid | 54.13 | 51.86 |
| TraesCS3B01G036800.1 | Wheat | plastid | 54.61 | 51.84 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 41.26 | 51.67 |
| Zm00001d031811_P001 | Maize | plastid | 54.61 | 51.61 |
| TraesCS6B01G170200.1 | Wheat | plastid | 53.16 | 51.53 |
| Zm00001d031813_P001 | Maize | extracellular | 54.13 | 51.26 |
| EES15134 | Sorghum | plastid | 54.13 | 51.26 |
| TraesCS7A01G504700.1 | Wheat | plastid | 52.18 | 50.95 |
| Solyc04g079210.2.1 | Tomato | cytosol | 19.9 | 50.62 |
| TraesCS2B01G185200.1 | Wheat | cytosol | 50.0 | 50.61 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 50.49 | 50.36 |
| TraesCS2D01G166800.1 | Wheat | cytosol | 49.51 | 50.25 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 49.03 | 49.75 |
| TraesCS3D01G033600.1 | Wheat | mitochondrion, peroxisome | 36.41 | 49.67 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 25.73 | 49.53 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 46.12 | 49.22 |
| HORVU5Hr1G119820.1 | Barley | plastid | 46.84 | 48.61 |
| TraesCS5B01G529000.1 | Wheat | cytosol | 46.84 | 48.61 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 48.54 | 48.54 |
| TraesCS5B01G529100.1 | Wheat | cytosol | 46.12 | 48.47 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 46.84 | 48.25 |
| TraesCS5D01G528100.1 | Wheat | cytosol | 45.87 | 48.21 |
| Zm00001d031815_P001 | Maize | cytosol | 51.21 | 48.06 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 53.88 | 47.54 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 55.34 | 47.5 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 45.15 | 47.45 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 33.25 | 47.24 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 47.82 | 46.79 |
| Solyc02g090660.1.1 | Tomato | cytosol, peroxisome, plastid | 31.31 | 46.74 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 44.9 | 46.02 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 37.38 | 44.9 |
| Os08t0376550-00 | Rice | cytosol | 19.42 | 44.2 |
| Solyc08g006850.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 39.56 | 43.24 |
| OQU80643 | Sorghum | cytosol | 50.49 | 42.28 |
| Solyc08g006860.2.1 | Tomato | extracellular | 39.08 | 42.04 |
| TraesCS3B01G036500.1 | Wheat | plastid | 45.15 | 41.89 |
| Solyc05g056030.2.1 | Tomato | cytosol | 31.8 | 28.11 |
| OQU83677 | Sorghum | cytosol | 21.84 | 27.03 |
| Solyc10g080690.1.1 | Tomato | cytosol | 27.91 | 26.62 |
| Solyc09g065240.2.1 | Tomato | cytosol | 24.03 | 25.85 |
| Solyc10g078530.1.1 | Tomato | cytosol | 26.94 | 25.52 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 |
| InterPro:IPR002641 | UniProt:K4BCJ8 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 |
| PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g090490.2 | EnsemblPlants:Solyc02g090490.2.1 | UniParc:UPI000276924A |
| SEG:seg | : | : | : | : | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:K4BCJ8]
Coordinates
chr2:-:52016684..52018898
Molecular Weight (calculated)
44994.4 Da
IEP (calculated)
8.558
GRAVY (calculated)
-0.088
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRMVLIAAA MTLFVTLQVL QPPLVVSAAT KGKTVTVLSI DGGGIRGIIP GTLLAFLESK LQELDGPNAR IADYFDVVAG TSTGGLVTTM LTAPNKDNRP
101: LYQAKDISNF YMQHGPQIFP QSRRNSFVRR ITNLFGGPKY DGIYLRTIIN SILGNLTMKQ TLTNTVIPTF DIKRLQPIIF STADAKANIS KNAQLSDVCL
201: STSAAPTYFP VHSFETKDAQ GKTRTFDLVD GGVAANNPTL MAITYVSKQI MTGNFQYEGM KNMDCNKMLV LSLGTGIGKQ EEKYNATVAS RWGMVGWVYN
301: NGATPLIDIY GDASADMVDI HTSTMFQTLG SEKNYIRIQD DNLTGEAASM DIATTQNMET LVQIGNDLLK KPISRVNLET GRYEPVVGEG TNEAAIVRFA
401: QLLSEERKLR IN
101: LYQAKDISNF YMQHGPQIFP QSRRNSFVRR ITNLFGGPKY DGIYLRTIIN SILGNLTMKQ TLTNTVIPTF DIKRLQPIIF STADAKANIS KNAQLSDVCL
201: STSAAPTYFP VHSFETKDAQ GKTRTFDLVD GGVAANNPTL MAITYVSKQI MTGNFQYEGM KNMDCNKMLV LSLGTGIGKQ EEKYNATVAS RWGMVGWVYN
301: NGATPLIDIY GDASADMVDI HTSTMFQTLG SEKNYIRIQD DNLTGEAASM DIATTQNMET LVQIGNDLLK KPISRVNLET GRYEPVVGEG TNEAAIVRFA
401: QLLSEERKLR IN
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.