Factsheet for Solyc02g090630.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
plastid 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040781	Potato	cytosol	88.1	87.22
VIT_07s0031g00860.t01	Wine grape	cytosol	66.33	64.22
VIT_07s0031g00870.t01	Wine grape	cytosol	65.82	63.88
KRH28482	Soybean	cytosol	63.8	62.53
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	63.54	62.44
Solyc04g079240.2.1	Tomato	nucleus	65.06	62.38
Solyc04g079250.2.1	Tomato	cytosol	62.53	60.99
Solyc04g079260.2.1	Tomato	cytosol	61.77	60.1
Bra017799.1-P	Field mustard	cytosol	60.76	58.25
CDX72620	Canola	cytosol	60.51	58.01
CDX75621	Canola	cytosol	58.48	56.76
GSMUA_Achr3P06850_001	Banana	cytosol	58.23	56.37
CDY42720	Canola	cytosol	58.73	56.17
CDX69271	Canola	cytosol	57.72	56.02
Bra011732.1-P	Field mustard	cytosol	53.67	55.5
Bra011730.1-P	Field mustard	cytosol	56.71	54.9
CDX75619	Canola	cytosol	56.71	54.9
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	57.47	54.83
AT4G37050.1	Thale cress	cytosol	58.73	54.21
CDX72619	Canola	cytosol	55.95	54.17
Bra017798.1-P	Field mustard	cytosol	55.44	53.68
CDX75620	Canola	cytosol, peroxisome, plastid	54.94	53.58
CDX69270	Canola	cytosol, peroxisome, plastid	54.94	53.58
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	54.94	53.58
CDX69269	Canola	cytosol	55.95	53.25
Solyc04g079210.2.1	Tomato	cytosol	21.77	53.09
Solyc04g079220.1.1	Tomato	cytosol	9.87	52.0
Solyc02g090490.2.1	Tomato	extracellular	53.92	51.7
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	53.67	51.58
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	52.91	50.98
Solyc02g065090.2.1	Tomato	nucleus	53.67	50.48
AT4G37060.2	Thale cress	cytosol, golgi, plastid	56.71	50.34
Solyc02g090660.1.1	Tomato	cytosol, peroxisome, plastid	32.66	46.74
Solyc08g006860.2.1	Tomato	extracellular	43.29	44.65
AT5G43590.2	Thale cress	mitochondrion	52.15	44.02
Solyc08g006850.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	41.27	43.24
CDY42719	Canola	cytosol	55.44	30.76
Solyc05g056030.2.1	Tomato	cytosol	29.11	24.68
Solyc10g080690.1.1	Tomato	cytosol	26.08	23.84
Solyc09g065240.2.1	Tomato	cytosol	22.03	22.72
Solyc10g078530.1.1	Tomato	cytosol	24.05	21.84

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372
InterPro:IPR002641	UniProt:K4BCL2	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	EnsemblPlantsGene:Solyc02g090630.2	EnsemblPlants:Solyc02g090630.2.1	UniParc:UPI00027675EA	SEG:seg

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:K4BCL2]

Coordinates

chr2:+:52178986..52181656

Molecular Weight (calculated)

43204.8 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.199

Length

395 amino acids

Sequence
(BLAST)

001: MPPPNTGKLI TILTIDGGGI RGIIPGVILA YLESQLQELD GEDARIADYF DLIAGTSTGG LVTAMLAAPN KDKRPLYAAK DITPFYIEHS PKIFPQISCC
101: SGLFAGAINL AKMINGPKYD GKYLHELIKR LLGGTRLHDT LTAVVIPTFD IKTLQPVIFS SYEANSKPEL NAELADICIS TSAAPTFLPA YCFNTKDAQN
201: EDREFNLIDG GVAANNPTLV AIGEVTKQTL MKHEDLFPIK PMDYGRFLVI SLGTGNAKNE GKYNAKMASK WGLLSWLTHD NSTPIVEAFN QASADMVDYH
301: NFVVFKALHS DDKYLRIQDD TLTGNLASVD ISTKENLQGL IKVGEELLDK PTSKINLDKG VYEAVENGGT NKEALRRFAK KLSDERKFRQ ANAGQ

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.