CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75619	Canola	cytosol	86.27	86.27
CDX69269	Canola	cytosol	86.03	84.58
CDX69270	Canola	cytosol, peroxisome, plastid	82.11	82.72
CDX75620	Canola	cytosol, peroxisome, plastid	82.11	82.72
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	83.58	82.37
AT4G37060.2	Thale cress	cytosol, golgi, plastid	79.9	73.26
CDX72620	Canola	cytosol	59.8	59.22
KRH28482	Soybean	cytosol	58.09	58.81
VIT_07s0031g00860.t01	Wine grape	cytosol	58.09	58.09
VIT_07s0031g00870.t01	Wine grape	cytosol	57.11	57.25
CDY42720	Canola	cytosol	57.84	57.14
CDX69271	Canola	cytosol	56.86	57.0
CDX75621	Canola	cytosol	56.86	57.0
PGSC0003DMT400040781	Potato	cytosol	55.64	56.89
Solyc02g090630.2.1	Tomato	cytosol	54.17	55.95
CDY42719	Canola	cytosol	97.06	55.62
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	54.66	55.47
CDY21469	Canola	cytosol, peroxisome, vacuole	51.72	51.84
CDX83197	Canola	cytosol	51.72	51.84
GSMUA_Achr3P06850_001	Banana	cytosol	51.23	51.23
CDX74862	Canola	cytosol	27.21	24.72
CDY07662	Canola	cytosol	28.19	24.16
CDY24974	Canola	cytosol	28.19	24.16
CDX89181	Canola	cytosol	22.79	24.03
CDX93922	Canola	cytosol	22.55	23.77
CDY44633	Canola	cytosol	28.19	23.66
CDX76689	Canola	cytosol	22.3	23.64
CDY56455	Canola	cytosol	21.08	23.5
CDX67618	Canola	mitochondrion	25.98	22.75
CDY56960	Canola	mitochondrion	26.72	22.43
CDX73423	Canola	mitochondrion	26.96	22.4
CDY43526	Canola	nucleus	26.23	21.93
CDY07512	Canola	mitochondrion	25.25	21.68
CDX68587	Canola	nucleus	26.47	21.64

Protein Annotations

EnsemblPlants:CDX72619	EnsemblPlantsGene:GSBRNA2T00100166001	Gene3D:3.40.1090.10	GO:A0A078C8X1	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6
PFAM:PF01734	PFscan:PS51635	ProteinID:CDX72619	ProteinID:CDX72619.1	SEG:seg	SUPFAM:SSF52151
UniParc:UPI0004EBC2E3	MapMan:5.7.2.2.3	:	:	:	:

Description

BnaC07g46410D

Coordinates

chrLK031796:+:2215522..2218157

Molecular Weight (calculated)

44645.7 Da

IEP (calculated)

6.945

GRAVY (calculated)

-0.214

Length

408 amino acids

Sequence
(BLAST)

001: MANDSSCKRN KPPSCGSLVT ILSLDGGGIR GTISGVILAC LEKQLQEIDG EDVRLADYFD VVAGTSTGGL ITAMLTVPDA SGRPHFAAKD IVPFYLEHCP
101: KIFPQPEGLA ALLPKLPKLL SGPKYDGKYL RSLLSNLLGE TKLHQTITNV VIPTFDMKKL QPAIFSSYQA LFDPSLDVKL SDICIGTSAA PTFFPPHYFS
201: NVDSQGKTSE FHLVDGGVTA SNPTLVAMTA VTKQIVKNNP DMGKLKPLGY DKFLVISIGT GSTKKVEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHFHSSVL FKALQSEDKY LRIDDDTLDG DAGSTDLATK SNLENLVKIG EKVLKNRVVH MNIDTGAYEP IPENVTNEEE LKRFAKILSE ERKLRRMRSE
401: TVTKDPSN

Best Arabidopsis Sequence Match ( AT4G37070.2 )
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Arabidopsis Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.