CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75621	Canola	cytosol	96.07	96.07
Bra011732.1-P	Field mustard	cytosol	86.73	92.41
CDX72620	Canola	cytosol	83.05	82.04
CDY42720	Canola	cytosol	78.87	77.72
AT4G37050.1	Thale cress	cytosol	78.13	74.3
VIT_07s0031g00860.t01	Wine grape	cytosol	60.44	60.29
PGSC0003DMT400040781	Potato	cytosol	57.25	58.4
KRH28482	Soybean	cytosol	57.74	58.31
VIT_07s0031g00870.t01	Wine grape	cytosol	58.23	58.23
Solyc02g090630.2.1	Tomato	cytosol	56.02	57.72
CDX75619	Canola	cytosol	57.49	57.35
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	56.51	57.21
CDX72619	Canola	cytosol	57.0	56.86
CDX75620	Canola	cytosol, peroxisome, plastid	55.77	56.05
CDX69270	Canola	cytosol, peroxisome, plastid	55.77	56.05
CDX83197	Canola	cytosol	56.02	56.02
CDY21469	Canola	cytosol, peroxisome, vacuole	56.02	56.02
CDX69269	Canola	cytosol	56.02	54.94
GSMUA_Achr3P06850_001	Banana	cytosol	53.07	52.94
CDY42719	Canola	cytosol	56.27	32.16
CDX74862	Canola	cytosol	26.04	23.61
CDY24974	Canola	cytosol	27.03	23.11
CDY07662	Canola	cytosol	27.03	23.11
CDX67618	Canola	mitochondrion	26.29	22.96
CDY44633	Canola	cytosol	27.27	22.84
CDX73423	Canola	mitochondrion	27.03	22.4
CDY56960	Canola	mitochondrion	26.54	22.22
CDX89181	Canola	cytosol	21.13	22.22
CDY56455	Canola	cytosol	19.9	22.13
CDY07512	Canola	mitochondrion	25.8	22.11
CDX93922	Canola	cytosol	20.88	21.96
CDX76689	Canola	cytosol	20.39	21.56
CDY43526	Canola	nucleus	24.82	20.7
CDX68587	Canola	nucleus	25.06	20.44

Protein Annotations

EnsemblPlants:CDX69271	EnsemblPlantsGene:GSBRNA2T00131086001	Gene3D:3.40.1090.10	GO:A0A078BWT0	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24
PFAM:PF01734	PFscan:PS51635	ProteinID:CDX69271	ProteinID:CDX69271.1	SEG:seg	SUPFAM:SSF52151
UniParc:UPI0004EF29CA	MapMan:5.7.2.2.3	:	:	:	:

Description

BnaC01g01820D

Coordinates

chrLK031789:+:3815533..3818056

Molecular Weight (calculated)

45212.1 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.213

Length

407 amino acids

Sequence
(BLAST)

001: MAFSSERRLC CLSPSYGQHV TILSIDGGGV RGIIPGIVLA YLESQLQELD GEEARLVDYF DVISGTSTGG LIVAMLTAPD KTNPNRNRPL FAAKEIVPFY
101: RKHCPKIFPH PRYVPSAFAL VRGPKYNGKY LREVIEDFLG DTRLTQTLTN VVIPCFDIKK LQPVIFSSYQ VYTNIDPVTD AKISDICLST SAAPTYLPAH
201: RFTNEDNEGN KHEYNLIDGG IAANNPTLCA IAEVTKQIVK KNPAMGDISP LDYTRVVVIS LGTGSIRNEE KYDAIMASKW GLVSWICADG SSPIIDCYNE
301: AIQDIVDYQS CVVFQALHSE TNYLRIDDDT LKGDIGSVDI STEKNMEGLV EVGKALLKKN VSRVNLETGH YEPISDHVTN EEALKRVAKI LSEERKLRES
401: RYHKLKT

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.