CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67618	Canola	mitochondrion	94.74	96.57
CDY56960	Canola	mitochondrion	90.95	88.89
CDX73423	Canola	mitochondrion	90.53	87.58
AT3G54950.1	Thale cress	mitochondrion	86.11	83.81
CDX74862	Canola	cytosol	72.63	76.84
CDY24974	Canola	cytosol	74.74	74.58
CDY07662	Canola	cytosol	74.53	74.37
CDY44633	Canola	cytosol	75.58	73.87
VIT_13s0019g04200.t01	Wine grape	cytosol	66.32	68.78
KRH34879	Soybean	cytosol	64.0	65.66
Solyc05g056030.2.1	Tomato	cytosol	62.53	63.73
PGSC0003DMT400060317	Potato	cytosol	62.32	63.52
GSMUA_Achr5P18500_001	Banana	cytosol	49.89	61.08
GSMUA_Achr2P12330_001	Banana	cytosol	50.32	59.75
GSMUA_Achr8P18860_001	Banana	cytosol	41.47	59.34
GSMUA_Achr5P03830_001	Banana	cytosol	53.89	58.99
CDY43526	Canola	nucleus	59.16	57.58
CDX68587	Canola	nucleus	60.42	57.52
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	64.21	56.07
GSMUA_Achr11P...	Banana	mitochondrion	33.05	54.51
EER95163	Sorghum	cytosol	51.58	53.26
Zm00001d028482_P001	Maize	cytosol	50.74	52.39
TraesCS4B01G221000.1	Wheat	cytosol	50.32	51.96
TraesCS4D01G221300.1	Wheat	cytosol	50.11	51.85
TraesCS4A01G083200.1	Wheat	cytosol	49.68	51.08
Os03t0254400-01	Rice	cytosol	50.32	50.96
CDY56455	Canola	cytosol	33.26	43.17
HORVU0Hr1G008670.3	Barley	cytosol	35.79	42.08
CDX93922	Canola	cytosol	33.68	41.34
CDX89181	Canola	cytosol	33.68	41.34
CDX76689	Canola	cytosol	33.47	41.3
CDX72620	Canola	cytosol	22.74	26.21
CDY42720	Canola	cytosol	22.74	26.15
CDY21469	Canola	cytosol, peroxisome, vacuole	22.32	26.04
CDX75621	Canola	cytosol	22.11	25.8
CDX69271	Canola	cytosol	22.11	25.8
CDX75620	Canola	cytosol, peroxisome, plastid	21.89	25.68
CDX69270	Canola	cytosol, peroxisome, plastid	21.89	25.68
CDX83197	Canola	cytosol	21.89	25.55
CDX75619	Canola	cytosol	21.68	25.25
CDX72619	Canola	cytosol	21.68	25.25
CDX69269	Canola	cytosol	21.68	24.82
CDY42719	Canola	cytosol	21.26	14.19

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	GO:A0A078F3A2	UniProt:A0A078F3A2	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlants:CDY07512
ProteinID:CDY07512	ProteinID:CDY07512.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00124541001	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI0004EF1248
SEG:seg	:	:	:	:	:

Description

BnaC06g15520DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078F3A2]

Coordinates

chrLK031979:+:173643..175623

Molecular Weight (calculated)

51067.7 Da

IEP (calculated)

8.273

GRAVY (calculated)

-0.291

Length

475 amino acids

Sequence
(BLAST)

001: MQRVSNKPSG GATTASVKHL IKQRGGGSGG GDTAAEDNSL LTDSQEPSID TDKLSYEIFS ILESKFLFGS SEPEQLNPAA VTGPAKNQRG KVCILSIDGG
101: GMRGILPGKA LAYLEHALKS KSGDPNARIA DYFDVAAGSG IGGVYTAMLF GSRDGNRPIF KAEDTWQFLT KNAKGLYGSS SSSSFVKRVM RTGSLGSSGT
201: GKVKRVMKES FSELTLKDTL KPVLIPCYDL ESSAPFLFSR ADALETDGYD FRLWEVCRAT WAETGVFEPV EMKSVDGTTK CVAIGGGLAM SNPTAAAITH
301: VLHNKQEFPF VRGVEDLLVL SLGMGQLLDW TAKHWARPAA LISNDGAADT VDQAVAMAFG HCRSSNYVRI QANGSSLGPC KPNIDTDPSG SNVNMLVGVA
401: EEMLKQKNVE SVLFGGKRIN EQSNFEKLDW LAGELVLEHQ RRNCRIAPTV AFKQSVHRAE QKTRGKDIGV TARER

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.