Factsheet for GSMUA_Achr2P12330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03830_001	Banana	cytosol	75.75	69.82
GSMUA_Achr8P18860_001	Banana	cytosol	54.25	65.36
GSMUA_Achr5P18500_001	Banana	cytosol	59.75	61.6
GSMUA_Achr11P...	Banana	mitochondrion	40.25	55.9
EER95163	Sorghum	cytosol	63.5	55.22
VIT_13s0019g04200.t01	Wine grape	cytosol	63.0	55.02
KRH34879	Soybean	cytosol	63.25	54.64
Zm00001d028482_P001	Maize	cytosol	62.75	54.57
Os03t0254400-01	Rice	cytosol	63.25	53.94
TraesCS4D01G221300.1	Wheat	cytosol	61.25	53.38
TraesCS4B01G221000.1	Wheat	cytosol	61.25	53.26
TraesCS4A01G083200.1	Wheat	cytosol	61.5	53.25
CDX74862	Canola	cytosol	59.5	53.01
PGSC0003DMT400060317	Potato	cytosol	61.25	52.58
Solyc05g056030.2.1	Tomato	cytosol	60.75	52.15
CDY07662	Canola	cytosol	61.25	51.47
CDY24974	Canola	cytosol	61.0	51.26
Bra000125.1-P	Field mustard	cytosol	61.25	50.72
CDX67618	Canola	mitochondrion	59.0	50.64
CDY07512	Canola	mitochondrion	59.75	50.32
AT3G54950.1	Thale cress	mitochondrion	60.75	49.8
CDY56960	Canola	mitochondrion	60.5	49.79
Bra003202.1-P	Field mustard	mitochondrion	59.25	49.79
Bra005058.1-P	Field mustard	cytosol	60.5	49.69
CDX73423	Canola	mitochondrion	60.75	49.49
CDY44633	Canola	cytosol	59.75	49.18
AT2G39220.1	Thale cress	cytosol	61.25	49.1
Bra007119.1-P	Field mustard	mitochondrion	60.25	48.59
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	62.75	46.14
CDY43526	Canola	nucleus	55.75	45.7
CDX68587	Canola	nucleus	56.5	45.29
AT4G29800.2	Thale cress	cytosol	57.5	43.73
HORVU0Hr1G008670.3	Barley	cytosol	43.0	42.57
GSMUA_AchrUn_...	Banana	cytosol	38.25	42.38
GSMUA_Achr11P...	Banana	cytosol	29.25	41.79
GSMUA_Achr5P02370_001	Banana	cytosol	39.5	40.2
GSMUA_Achr5P26630_001	Banana	cytosol	34.5	40.0
GSMUA_Achr8P07160_001	Banana	cytosol	37.5	39.68
GSMUA_Achr2P01360_001	Banana	cytosol	35.5	35.59
GSMUA_Achr6P31310_001	Banana	cytosol	38.5	32.77
GSMUA_AchrUn_...	Banana	plastid	29.5	26.82
GSMUA_Achr7P11810_001	Banana	cytosol	26.5	26.11
GSMUA_Achr10P...	Banana	cytosol	25.5	25.37
GSMUA_Achr4P31750_001	Banana	cytosol	43.25	25.37
GSMUA_Achr2P22340_001	Banana	cytosol	24.75	23.86
GSMUA_Achr3P06850_001	Banana	cytosol	23.0	22.55
GSMUA_Achr6P02240_001	Banana	cytosol	23.25	22.52
GSMUA_Achr3P20370_001	Banana	cytosol	22.75	21.98
GSMUA_Achr9P27010_001	Banana	cytosol	23.5	21.91
GSMUA_Achr7P18980_001	Banana	plastid	22.5	21.79
GSMUA_Achr7P12940_001	Banana	cytosol	25.5	21.43
GSMUA_Achr11P...	Banana	cytosol	16.75	19.82

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	InterPro:Acyl_Trfase/lysoPLipase	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr2G12330_001	EnsemblPlants:GSMUA_Achr2P12330_001	EnsemblPlants:GSMUA_Achr2T12330_001	InterPro:IPR002641	UniProt:M0S7C4	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI000296EE8D	SEG:seg

Description

Putative Patatin group A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G12330_001]

Coordinates

chr2:+:14806961..14809387

Molecular Weight (calculated)

43547.8 Da

IEP (calculated)

6.023

GRAVY (calculated)

-0.266

Length

400 amino acids

Sequence
(BLAST)

001: MLVAVRQGKK GGGEKKEEEE EEPSIHADKL NCDIFSILES KFLFGYDDHQ LWVPKASQRG KVCVLCIDGG GGGAMRGILP GKALAYLEHA LRSKSGDPDA
101: RISDYFDVVA GTGVGGVFAV MLFATRDGAR PLFRADDTWL FQGGGGGGTA TAAMERVMKE AFGDRLTLRN TSESFDFRLW EVCRATWAEP GRFEPAEIRS
201: VDRSTTCVGV DGGLTMSNPA AAAITHVLHN KQEFPFVRGV EDLMVLSLGC GTGSGTTVVP ETDQRRLRRW GAREWVRPIT RIAADGAADL VDQSVALAFG
301: PYRSSNYVRI QANPSTMGRC GVDMDCDASP ANVEVLLGAA EEMLKQKNVE SVLFSGRRIG EETNMEKLDW FAGELVLEHQ QRRCRIAPTV AFKQATSKSN

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.