Factsheet for GSMUA_Achr2P22340_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	70.84	73.13
GSMUA_Achr7P11810_001	Banana	cytosol	68.67	70.2
GSMUA_Achr11P...	Banana	cytosol	51.33	63.02
GSMUA_Achr7P18980_001	Banana	plastid	61.93	62.23
GSMUA_Achr6P02240_001	Banana	cytosol	60.96	61.26
GSMUA_Achr3P20370_001	Banana	cytosol	58.55	58.7
GSMUA_Achr3P06850_001	Banana	cytosol	56.87	57.84
GSMUA_Achr9P27010_001	Banana	cytosol	56.39	54.55
GSMUA_Achr7P12940_001	Banana	cytosol	57.59	50.21
GSMUA_Achr2P12330_001	Banana	cytosol	23.86	24.75
GSMUA_Achr11P...	Banana	cytosol	16.39	24.29
GSMUA_Achr5P03830_001	Banana	cytosol	25.3	24.19
GSMUA_Achr5P18500_001	Banana	cytosol	21.69	23.2
GSMUA_Achr8P18860_001	Banana	cytosol	18.55	23.19
GSMUA_Achr8P07160_001	Banana	cytosol	20.24	22.22
GSMUA_Achr5P26630_001	Banana	cytosol	18.31	22.03
GSMUA_AchrUn_...	Banana	cytosol	18.8	21.61
GSMUA_Achr11P...	Banana	mitochondrion	14.7	21.18
GSMUA_Achr5P02370_001	Banana	cytosol	20.0	21.12
GSMUA_Achr2P01360_001	Banana	cytosol	18.55	19.3
GSMUA_Achr6P31310_001	Banana	cytosol	20.0	17.66
GSMUA_AchrUn_...	Banana	plastid	17.11	16.14
GSMUA_Achr4P31750_001	Banana	cytosol	23.86	14.52

Protein Annotations

EnsemblPlants:GSMUA_Achr2P22340_001	EnsemblPlants:GSMUA_Achr2T22340_001	EnsemblPlantsGene:GSMUA_Achr2G22340_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	PFAM:PF01734
PFscan:PS51635	SUPFAM:SSF52151	UniParc:UPI0002952D4A	UniProt:M0SA75	MapMan:5.7.2.2.3	:

Description

Putative Patatin group A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22340_001]

Coordinates

chr2:+:21447363..21449216

Molecular Weight (calculated)

44836.3 Da

IEP (calculated)

5.757

GRAVY (calculated)

-0.209

Length

415 amino acids

Sequence
(BLAST)

001: MASDQTPPAT ADAPISTPPP SFGKRVTVLC IDGGGVRGLI PATIIAFLEA ELQLDGPEAR IADYFDVIAG TSTGGLVTAM LTAPNKEKRP LFAAKDIVQF
101: YLDNSPKIFP QKNAGLFNSA LNLVGAVSGP KYDGKYLHAI IRQLLGDTRL SQTLTNVVIP TFDIKFLQPT IFSTYQTKST PLKDALLSDI CIGTSAAPTY
201: LPGHYFETKD DNGNKRSFNL VDGGVAANNP TLTAMTEVSK EILLSNPDFF SYQPVEYDRF LVISLGTGAP KQEEKFTAQE SAKWGVLGWL LNKGTTPLID
301: IFTQASADMV DIHASVLFQA LNKGKNYLRI EDDTLTGQTS SVDVSTKKNL QDLVDIGNSL LKKPVSRVNI ETGHSEAVDG EGTNEAALTG FAKKLSDEKR
401: RRQSKQLTSS DATQH

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.