Factsheet for GSMUA_Achr3P20370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18980_001	Banana	plastid	82.85	83.05
GSMUA_Achr6P02240_001	Banana	cytosol	75.12	75.3
GSMUA_Achr10P...	Banana	cytosol	60.87	62.69
GSMUA_Achr7P11810_001	Banana	cytosol	58.21	59.36
GSMUA_Achr2P22340_001	Banana	cytosol	58.7	58.55
GSMUA_Achr11P...	Banana	cytosol	44.69	54.73
GSMUA_Achr3P06850_001	Banana	cytosol	51.69	52.45
GSMUA_Achr9P27010_001	Banana	cytosol	52.66	50.82
GSMUA_Achr7P12940_001	Banana	cytosol	55.31	48.11
GSMUA_Achr5P18500_001	Banana	cytosol	21.98	23.45
GSMUA_Achr2P12330_001	Banana	cytosol	21.98	22.75
GSMUA_Achr5P03830_001	Banana	cytosol	23.19	22.12
GSMUA_Achr8P18860_001	Banana	cytosol	17.63	21.99
GSMUA_Achr11P...	Banana	cytosol	14.25	21.07
GSMUA_AchrUn_...	Banana	cytosol	18.36	21.05
GSMUA_Achr5P26630_001	Banana	cytosol	17.39	20.87
GSMUA_Achr8P07160_001	Banana	cytosol	18.6	20.37
GSMUA_Achr11P...	Banana	mitochondrion	14.01	20.14
GSMUA_Achr5P02370_001	Banana	cytosol	17.15	18.07
GSMUA_Achr2P01360_001	Banana	cytosol	17.15	17.79
GSMUA_Achr6P31310_001	Banana	cytosol	17.87	15.74
GSMUA_AchrUn_...	Banana	plastid	14.73	13.86
GSMUA_Achr4P31750_001	Banana	cytosol	19.81	12.02

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr3G20370_001	EnsemblPlants:GSMUA_Achr3P20370_001	EnsemblPlants:GSMUA_Achr3T20370_001	InterPro:IPR002641	UniProt:M0SGA3	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI000294F8BC
SEG:seg	:	:	:	:	:

Description

Putative Patatin group A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20370_001]

Coordinates

chr3:-:21520469..21522392

Molecular Weight (calculated)

45668.6 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.237

Length

414 amino acids

Sequence
(BLAST)

001: MAQTQPNGSQ HSHHHHHHHH HHLQPCEGKL ITVLSIDGGG VRGLIPGTVL AFLELKLQEL DGPDARIADY FDVITGTSTG GLLSAMITSP DENKRPLFSA
101: NQVIDFYLEN SPKIFPQGSG MFSSLTKLVS AIRGPKYDGK FLHSKVKQLL TETKLSETLT NVIIPTFDIK LLQPVIFSSF EARHSPLKNA HLADICISTS
201: AAPTYLPAHY FETTDSDGKS HSYNLIDGGI AANNPTLVAM SQIKKEIALT NKNFANFKSI DYHKFIIISI GTGSAKVEQK FSAHLASKWG VLQWLYHGGS
301: NPLIDSFFQG SADVVDIHMS SLFQSLNCEK NYLRIQDDTL MGERSSVDVS TKENLLELVQ IGKNLLNKKV SRVNLETGIF QEIDEEGTNA DALTQLAKRL
401: SRERQLRKAT VAAK

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.