Factsheet for GSMUA_Achr11P00540_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18500_001	Banana	cytosol	76.39	56.7
GSMUA_Achr8P18860_001	Banana	cytosol	57.29	49.7
GSMUA_Achr5P03830_001	Banana	cytosol	64.58	42.86
GSMUA_Achr2P12330_001	Banana	cytosol	55.9	40.25
VIT_13s0019g04200.t01	Wine grape	cytosol	62.15	39.08
KRH34879	Soybean	cytosol	62.5	38.88
EER95163	Sorghum	cytosol	60.76	38.04
Zm00001d028482_P001	Maize	cytosol	59.72	37.39
PGSC0003DMT400060317	Potato	cytosol	59.03	36.48
Solyc05g056030.2.1	Tomato	cytosol	59.03	36.48
Os03t0254400-01	Rice	cytosol	58.33	35.82
TraesCS4D01G221300.1	Wheat	cytosol	56.94	35.73
TraesCS4A01G083200.1	Wheat	cytosol	57.29	35.71
CDX74862	Canola	cytosol	55.21	35.41
TraesCS4B01G221000.1	Wheat	cytosol	56.25	35.22
CDY24974	Canola	cytosol	57.29	34.66
CDY07662	Canola	cytosol	57.29	34.66
Bra000125.1-P	Field mustard	cytosol	57.29	34.16
AT2G39220.1	Thale cress	cytosol	58.68	33.87
CDX67618	Canola	mitochondrion	54.17	33.48
Bra003202.1-P	Field mustard	mitochondrion	54.86	33.19
Bra005058.1-P	Field mustard	cytosol	55.9	33.06
CDY07512	Canola	mitochondrion	54.51	33.05
CDY44633	Canola	cytosol	55.56	32.92
CDX73423	Canola	mitochondrion	55.56	32.59
AT3G54950.1	Thale cress	mitochondrion	54.86	32.38
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	61.11	32.35
CDY56960	Canola	mitochondrion	54.17	32.1
Bra007119.1-P	Field mustard	mitochondrion	54.51	31.65
HORVU0Hr1G008670.3	Barley	cytosol	40.97	29.21
CDX68587	Canola	nucleus	50.0	28.86
CDY43526	Canola	nucleus	48.61	28.69
AT4G29800.2	Thale cress	cytosol	50.69	27.76
GSMUA_Achr5P02370_001	Banana	cytosol	36.11	26.46
GSMUA_AchrUn_...	Banana	cytosol	30.21	24.1
GSMUA_Achr8P07160_001	Banana	cytosol	31.6	24.07
GSMUA_Achr2P01360_001	Banana	cytosol	31.94	23.06
GSMUA_Achr5P26630_001	Banana	cytosol	26.74	22.32
GSMUA_Achr6P31310_001	Banana	cytosol	35.42	21.7
GSMUA_Achr11P...	Banana	cytosol	21.88	18.64
GSMUA_Achr7P11810_001	Banana	cytosol	22.92	16.26
GSMUA_Achr11P...	Banana	cytosol	15.62	16.07
GSMUA_Achr10P...	Banana	cytosol	21.88	15.67
GSMUA_Achr3P06850_001	Banana	cytosol	21.53	15.2
GSMUA_Achr2P22340_001	Banana	cytosol	21.18	14.7
GSMUA_Achr6P02240_001	Banana	cytosol	20.49	14.29
GSMUA_Achr3P20370_001	Banana	cytosol	20.14	14.01
GSMUA_Achr7P12940_001	Banana	cytosol	22.92	13.87
GSMUA_Achr7P18980_001	Banana	plastid	19.44	13.56
GSMUA_Achr9P27010_001	Banana	cytosol	20.14	13.52
GSMUA_Achr4P31750_001	Banana	cytosol	31.6	13.34
GSMUA_AchrUn_...	Banana	plastid	17.01	11.14

Protein Annotations

EnsemblPlants:GSMUA_Achr11P00540_001	EnsemblPlants:GSMUA_Achr11T00540_001	EnsemblPlantsGene:GSMUA_Achr11G00540_001	Gene3D:3.40.1090.10	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	PANTHER:PTHR32241	SEG:seg	SUPFAM:SSF52151	UniParc:UPI0002966A35	UniProt:M0RN85
MapMan:5.7.2.2.4	:	:	:	:	:

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G00540_001]

Coordinates

chr11:-:318406..319952

Molecular Weight (calculated)

31746.0 Da

IEP (calculated)

8.119

GRAVY (calculated)

-0.275

Length

288 amino acids

Sequence
(BLAST)

001: MLFATRDGAR PLFRGEDTWR FLADRGKRLF KKTPPSSSSS PGLFVRCLFP GGGGSTTTAA MEKAMKEAFG ESLTLKDTVK PVLIPCYDLR SSAPLVFSRA
101: DALESESFDF RLWEEFPFVR GVEDLMMLSL GCGEAGGGAT PVVAETEYRK LRRWGPREWA QPIARIAANG AADLVDHAVA LAFGQCRNSN YLRVQADISS
201: MGRCSVEEVD HDASPGNVKL LLEAAEAMLR QKNVESVLFG GKMTREQSNM EKLDWFAGEL VLEHERRSCR IAPTVAFKQP IPKSTSKS

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.