Factsheet for GSMUA_Achr10P25640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 3
plastid 1
plasma membrane 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P11810_001	Banana	cytosol	80.85	80.05
GSMUA_Achr2P22340_001	Banana	cytosol	73.13	70.84
GSMUA_Achr7P18980_001	Banana	plastid	65.42	63.68
GSMUA_Achr6P02240_001	Banana	cytosol	64.43	62.71
GSMUA_Achr3P20370_001	Banana	cytosol	62.69	60.87
GSMUA_Achr11P...	Banana	cytosol	50.75	60.35
GSMUA_Achr3P06850_001	Banana	cytosol	56.97	56.13
GSMUA_Achr9P27010_001	Banana	cytosol	56.47	52.91
GSMUA_Achr7P12940_001	Banana	cytosol	57.96	48.95
GSMUA_Achr2P12330_001	Banana	cytosol	25.37	25.5
GSMUA_Achr5P03830_001	Banana	cytosol	27.36	25.35
GSMUA_Achr8P18860_001	Banana	cytosol	20.65	25.0
GSMUA_Achr11P...	Banana	cytosol	17.16	24.64
GSMUA_Achr5P18500_001	Banana	cytosol	22.89	23.71
GSMUA_Achr5P26630_001	Banana	cytosol	19.4	22.61
GSMUA_AchrUn_...	Banana	cytosol	20.15	22.44
GSMUA_Achr8P07160_001	Banana	cytosol	20.65	21.96
GSMUA_Achr11P...	Banana	mitochondrion	15.67	21.88
GSMUA_Achr5P02370_001	Banana	cytosol	20.4	20.87
GSMUA_Achr2P01360_001	Banana	cytosol	19.15	19.3
GSMUA_Achr6P31310_001	Banana	cytosol	21.64	18.51
GSMUA_AchrUn_...	Banana	plastid	17.66	16.14
GSMUA_Achr4P31750_001	Banana	cytosol	24.38	14.37

Protein Annotations

EnsemblPlants:GSMUA_Achr10P25640_001	EnsemblPlants:GSMUA_Achr10T25640_001	EnsemblPlantsGene:GSMUA_Achr10G25640_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	PFAM:PF01734
PFscan:PS51635	SUPFAM:SSF52151	UniParc:UPI000296A0E5	UniProt:M0RLD8	MapMan:5.7.2.2.3	:

Description

Putative Patatin group A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G25640_001]

Coordinates

chr10:-:29560972..29562706

Molecular Weight (calculated)

43826.5 Da

IEP (calculated)

5.160

GRAVY (calculated)

-0.143

Length

402 amino acids

Sequence
(BLAST)

001: MATTGDLSAN PPPALGKLVT VLSIDGGGVR GLIPATLLAF LESKLQELDG ADARIADYFD VIAGTSTGGL VTAMLTAPDK DKRPLFTAKQ IIQFYLDNCP
101: KIFPRKKAGL LNPLLNLFGA VTGPKYDGKY LHSKVQQLLG DTKLSQTLTN VVIPTFDIKF LQPIIFSTFE TKSTPLKDAL LSDVCVSTSA APTYLPGHCF
201: ETKDDEGSTR EFNLIDGGVA ANNPTLTAMN QVTKEIFMEN ADFFPIKPVD YGRFLVISLG TGSNKQEERF SAEESGKWGL LGWLYNKGTT PIIDIFSQAS
301: ADMVDIHASV LFQALHSEQH YLRIQEDALV GDTASVDVST RENLEKLMEV GGNLLKKPVS RVNLENGTFE PCDGEGTNEE ALTRFARRLS SERKLRNSKL
401: PL

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.