Factsheet for GSMUA_Achr11P09800_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
plastid 2
cytosol 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr7P12940_001
GSMUA_Achr9P27010_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	GSMUA_Achr11P...	AT2G26560.1	21798944
AT2G26560.1	GSMUA_Achr7P12940_001	AT2G26560.1	21798944
AT2G26560.1	GSMUA_Achr9P27010_001	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0462400-00	Rice	cytosol	63.02	62.28
HORVU4Hr1G050060.10	Barley	plastid	46.45	60.85
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	36.09	60.7
HORVU2Hr1G060260.1	Barley	plastid	48.82	60.0
Zm00001d005911_P001	Maize	cytosol	68.34	57.46
TraesCS5D01G249800.1	Wheat	cytosol	68.64	57.28
TraesCS5A01G243200.1	Wheat	cytosol	67.75	56.54
HORVU5Hr1G069130.5	Barley	cytosol	67.75	56.54
KXG35787	Sorghum	cytosol	65.68	56.49
VIT_18s0001g10850.t01	Wine grape	cytosol	68.34	55.93
TraesCS5B01G241100.2	Wheat	cytosol	67.16	55.64
VIT_18s0001g10910.t01	Wine grape	cytosol	67.75	55.45
VIT_18s0001g10870.t01	Wine grape	cytosol	67.75	55.45
Bra000578.1-P	Field mustard	cytosol	62.72	52.35
CDX83197	Canola	cytosol	62.72	52.09
CDY21469	Canola	cytosol, peroxisome, vacuole	62.43	51.84
GSMUA_Achr2P22340_001	Banana	cytosol	63.02	51.33
GSMUA_Achr10P...	Banana	cytosol	60.35	50.75
KRH15338	Soybean	cytosol	60.65	50.25
KRH15334	Soybean	cytosol	60.35	50.0
VIT_18s0001g10930.t01	Wine grape	cytosol	45.86	49.52
GSMUA_Achr7P11810_001	Banana	cytosol	59.17	49.26
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	59.17	49.14
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	66.57	48.91
KRH05708	Soybean	cytosol	54.44	48.81
GSMUA_Achr3P06850_001	Banana	cytosol	58.58	48.53
KRH05709	Soybean	cytosol	58.58	48.53
GSMUA_Achr9P27010_001	Banana	cytosol	60.35	47.55
GSMUA_Achr7P18980_001	Banana	plastid	57.4	46.97
GSMUA_Achr6P02240_001	Banana	cytosol	57.4	46.97
GSMUA_Achr7P12940_001	Banana	cytosol	64.5	45.8
GSMUA_Achr3P20370_001	Banana	cytosol	54.73	44.69
VIT_18s0001g10900.t01	Wine grape	cytosol	21.89	36.82
HORVU4Hr1G019140.24	Barley	cytosol	20.41	31.8
GSMUA_Achr11P...	Banana	mitochondrion	18.64	21.88
GSMUA_Achr5P26630_001	Banana	cytosol	18.93	18.55
GSMUA_AchrUn_...	Banana	cytosol	19.53	18.28
GSMUA_Achr5P02370_001	Banana	cytosol	20.12	17.3
GSMUA_Achr5P03830_001	Banana	cytosol	22.19	17.28
GSMUA_Achr8P07160_001	Banana	cytosol	19.23	17.2
GSMUA_Achr2P12330_001	Banana	cytosol	19.82	16.75
GSMUA_Achr11P...	Banana	cytosol	13.61	16.43
GSMUA_Achr2P01360_001	Banana	cytosol	18.64	15.79
GSMUA_Achr5P18500_001	Banana	cytosol	17.75	15.46
GSMUA_Achr8P18860_001	Banana	cytosol	14.5	14.76
GSMUA_Achr6P31310_001	Banana	cytosol	19.23	13.83
GSMUA_Achr4P31750_001	Banana	cytosol	22.49	11.14
GSMUA_AchrUn_...	Banana	plastid	10.95	8.41

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09800_001	EnsemblPlants:GSMUA_Achr11T09800_001	EnsemblPlantsGene:GSMUA_Achr11G09800_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	PFAM:PF01734
PFscan:PS51635	SUPFAM:SSF52151	UniParc:UPI0002961547	UniProt:M0RQW0	MapMan:5.7.2.2.3	:

Description

Putative Patatin group M-3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09800_001]

Coordinates

chr11:+:7631786..7633895

Molecular Weight (calculated)

37868.3 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.367

Length

338 amino acids

Sequence
(BLAST)

001: MLTAPNMQNR PLYAAKDIKE FYLNHSPKIF PQSRSLLIPS WSAKVIRAII GPRYDGKYLH ELIRRNLGET RLHQTLTNVV IPTFDIKRLQ PTIFSSYKVK
101: NNPLLDARLS DICIGTSAAP TYLPAYDFQT EDSQGNIREF NLIDGGLAAN NPALVAMGEI TKETFEENPD FFPIKPMDYH RFLVISLGTG SSKEERYSAN
201: HAKRWGVLGW LLSNGSTPLV DAFMQASADM VDIHISEAFQ ALHSGKNYLR IEDDALSGIL ASVDTSTKEN LENLVKVGEM LLKKPVSRVN LETGHVEPVS
301: EGEGTNEEAL IRLAKLLSDE RRLREMRSPH SKSSRTGK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.