Factsheet for GSMUA_Achr5P18500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	56.7	76.39
GSMUA_Achr8P18860_001	Banana	cytosol	61.86	72.29
GSMUA_Achr2P12330_001	Banana	cytosol	61.6	59.75
GSMUA_Achr5P03830_001	Banana	cytosol	65.46	58.53
VIT_13s0019g04200.t01	Wine grape	cytosol	63.66	53.93
EER95163	Sorghum	cytosol	63.4	53.48
KRH34879	Soybean	cytosol	63.4	53.13
Zm00001d028482_P001	Maize	cytosol	62.89	53.04
Os03t0254400-01	Rice	cytosol	62.37	51.6
TraesCS4A01G083200.1	Wheat	cytosol	60.31	50.65
TraesCS4D01G221300.1	Wheat	cytosol	59.79	50.54
TraesCS4B01G221000.1	Wheat	cytosol	59.54	50.22
CDX74862	Canola	cytosol	57.99	50.11
Solyc05g056030.2.1	Tomato	cytosol	60.05	50.0
CDX67618	Canola	mitochondrion	60.05	50.0
CDY07512	Canola	mitochondrion	61.08	49.89
PGSC0003DMT400060317	Potato	cytosol	59.54	49.57
Bra003202.1-P	Field mustard	mitochondrion	60.31	49.16
CDY07662	Canola	cytosol	60.05	48.95
AT3G54950.1	Thale cress	mitochondrion	61.34	48.77
CDY24974	Canola	cytosol	59.79	48.74
CDY56960	Canola	mitochondrion	60.82	48.56
Bra000125.1-P	Field mustard	cytosol	60.05	48.24
CDX73423	Canola	mitochondrion	60.57	47.86
Bra007119.1-P	Field mustard	mitochondrion	60.82	47.58
CDY44633	Canola	cytosol	59.02	47.12
AT2G39220.1	Thale cress	cytosol	60.31	46.89
Bra005058.1-P	Field mustard	cytosol	58.76	46.82
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	62.63	44.67
CDX68587	Canola	nucleus	55.67	43.29
CDY43526	Canola	nucleus	54.12	43.03
AT4G29800.2	Thale cress	cytosol	56.96	42.02
HORVU0Hr1G008670.3	Barley	cytosol	42.78	41.09
GSMUA_Achr8P07160_001	Banana	cytosol	38.4	39.42
GSMUA_AchrUn_...	Banana	cytosol	36.34	39.06
GSMUA_Achr5P02370_001	Banana	cytosol	38.92	38.42
GSMUA_Achr2P01360_001	Banana	cytosol	37.11	36.09
GSMUA_Achr5P26630_001	Banana	cytosol	31.19	35.07
GSMUA_Achr11P...	Banana	cytosol	25.0	34.64
GSMUA_Achr6P31310_001	Banana	cytosol	39.69	32.77
GSMUA_Achr7P11810_001	Banana	cytosol	24.74	23.65
GSMUA_AchrUn_...	Banana	plastid	26.03	22.95
GSMUA_Achr10P...	Banana	cytosol	23.71	22.89
GSMUA_Achr4P31750_001	Banana	cytosol	39.18	22.29
GSMUA_Achr3P20370_001	Banana	cytosol	23.45	21.98
GSMUA_Achr3P06850_001	Banana	cytosol	22.94	21.81
GSMUA_Achr2P22340_001	Banana	cytosol	23.2	21.69
GSMUA_Achr6P02240_001	Banana	cytosol	22.68	21.31
GSMUA_Achr7P18980_001	Banana	plastid	22.68	21.31
GSMUA_Achr7P12940_001	Banana	cytosol	23.97	19.54
GSMUA_Achr9P27010_001	Banana	cytosol	21.39	19.35
GSMUA_Achr11P...	Banana	cytosol	15.46	17.75

Protein Annotations

EnsemblPlants:GSMUA_Achr5P18500_001	EnsemblPlants:GSMUA_Achr5T18500_001	EnsemblPlantsGene:GSMUA_Achr5G18500_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI0002952F83	UniProt:M0SZM9	MapMan:5.7.2.2.4	:

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G18500_001]

Coordinates

chr5:-:19967630..19969112

Molecular Weight (calculated)

42426.7 Da

IEP (calculated)

5.347

GRAVY (calculated)

-0.109

Length

388 amino acids

Sequence
(BLAST)

001: MAVAAEEEEE EKLGFDTDKL SHEIFSILES KFLFGCDDTK LWSQRGKVCV LCIDGGGGCG MRGILPGKVL AYLEHALKSK SGDPNARISD YFDIAAGTGV
101: GGVLASMIFA TRDGSLPLFR ADDTWRFFVD RGERLFRKAS PSPSSSGFLR CLFPGGGGST TAAMERAMKE VFGEGLTLRD TVKPVLIPCY DLRSSAPFVF
201: SRADALESES FDFRLWEQEF PFVRGVEDLM VLSLGCGEVA VTEHLKLSRW GPKQEARPIA RIAADGAADL VDHAVALAFG QCRSSNYVRV QANGWNTGMC
301: SVDVDHDASL GNVKVLLEAA EEMLRQKNVE SVLFGGKRIT EQTNMEKLDW LAGELVVEHQ RRNCRIAPTV AFKQAVTKSS MTNLSQAI

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.