CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

plastid 2
extracellular 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34879	Soybean	cytosol	81.07	95.25
VIT_13s0019g04200.t01	Wine grape	cytosol	66.91	79.48
Solyc05g056030.2.1	Tomato	cytosol	61.4	71.67
PGSC0003DMT400060317	Potato	cytosol	61.21	71.46
CDY07662	Canola	cytosol	59.93	68.49
CDY24974	Canola	cytosol	59.56	68.07
CDX74862	Canola	cytosol	55.88	67.71
Bra000125.1-P	Field mustard	cytosol	59.93	67.49
AT3G54950.1	Thale cress	mitochondrion	58.82	65.57
AT2G39220.1	Thale cress	cytosol	59.74	65.13
CDY44633	Canola	cytosol	58.09	65.02
CDX67618	Canola	mitochondrion	55.51	64.81
CDX73423	Canola	mitochondrion	58.27	64.56
Bra003202.1-P	Field mustard	mitochondrion	56.43	64.5
GSMUA_Achr8P18860_001	Banana	cytosol	39.34	64.46
Bra005058.1-P	Field mustard	cytosol	57.54	64.27
CDY07512	Canola	mitochondrion	56.07	64.21
CDY56960	Canola	mitochondrion	57.35	64.2
Bra007119.1-P	Field mustard	mitochondrion	58.09	63.71
GSMUA_Achr5P03830_001	Banana	cytosol	50.37	63.13
GSMUA_Achr2P12330_001	Banana	cytosol	46.14	62.75
GSMUA_Achr5P18500_001	Banana	cytosol	44.67	62.63
GSMUA_Achr11P...	Banana	mitochondrion	32.35	61.11
CDX68587	Canola	nucleus	54.23	59.12
CDY43526	Canola	nucleus	52.94	59.02
AT4G29800.2	Thale cress	cytosol	55.7	57.6
EER95163	Sorghum	cytosol	47.98	56.74
Zm00001d028482_P001	Maize	cytosol	47.24	55.87
Os03t0254400-01	Rice	cytosol	46.69	54.16
TraesCS4B01G221000.1	Wheat	cytosol	45.59	53.91
TraesCS4D01G221300.1	Wheat	cytosol	45.4	53.81
TraesCS4A01G083200.1	Wheat	cytosol	45.59	53.68
KRH36757	Soybean	cytosol	38.24	47.93
KRH11757	Soybean	cytosol	38.05	47.92
KRH71425	Soybean	cytosol	32.17	46.17
KRH32021	Soybean	cytosol	31.8	45.53
HORVU0Hr1G008670.3	Barley	cytosol	32.9	44.31
KRG95536	Soybean	cytosol	30.88	43.98
KRH67210	Soybean	cytosol	30.51	41.5
KRH61261	Soybean	cytosol, peroxisome, plastid	13.24	32.0
KRH51959	Soybean	nucleus	21.88	28.74
KRH05709	Soybean	cytosol	20.59	27.45
KRH15336	Soybean	cytosol	20.22	26.96
KRH05706	Soybean	cytosol, extracellular, nucleus	18.57	26.86
KRH05707	Soybean	cytosol	20.04	26.65
KRH28482	Soybean	cytosol	19.49	26.3
KRH15338	Soybean	cytosol	19.3	25.74
KRH15334	Soybean	cytosol	19.12	25.49
KRH05708	Soybean	cytosol	17.46	25.2
KRH48827	Soybean	cytosol, plastid	10.29	23.53
KRH48830	Soybean	extracellular, vacuole	18.01	23.45
KRH48829	Soybean	endoplasmic reticulum, extracellular	16.91	22.6
KRH15337	Soybean	cytosol	6.8	22.42

Protein Annotations

EntrezGene:100815051	Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A0R0EMJ8	EMBL:ACUP02012712	InterPro:Acyl_Trfase/lysoPLipase
EnsemblPlantsGene:GLYMA_20G179600	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	ProteinID:KRG91894.1	EnsemblPlants:KRG91895
ProteinID:KRG91895	ProteinID:KRG91895.1	ProteinID:KRG91896.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635
PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI0003DED097	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:-:41711136..41716373

Molecular Weight (calculated)

59942.9 Da

IEP (calculated)

9.154

GRAVY (calculated)

-0.294

Length

544 amino acids

Sequence
(BLAST)

001: MNSETQRKRV LYVLELRQIV YICVWDLSSW LVEHSCQMRF KLHAIHAQDV LKTTPEREQK KKKKALFQKK FPIFKEKRKR EKMDCSNELE MQEPSIETDK
101: LSYEIFSILE SKFLFGYDDP KLWFPKQIPT KPESQTPAAT AAVNGVSSVK NQRGKICILA IDGGGMRGIL AGKALAYLEA ALKKKSGDQS ATIADYFDVA
201: AGAGVGGIFT AMLFATKDHR RPIFSADDTW RFLAEKGNKF YRAGGGASNR GFLKKILSGG DSGSVSSATA GLEKAVKEAF TAEKGGSLTL KDTIKPVLIP
301: CYDLSSTAPF LFSRADALET DSFDFRLWEV CRATSAGPGL FEPVQMRSVD GQTKCVAVDG GLAMSNPTGA AITHVLHNKQ EFPFVRGVED LLVLSLGTGQ
401: LLEVSYDFDR VKRWKAKDWA RPMALISGDG SSDLVDQAVA MAFGQCRSTN YVRIQANGSS MGRCGPNVDT DSSPGNVKML IGIAEEMLKQ ENVESVLFGG
501: KRIGEQSNFE KLDWFAGELV QEHQRRSCRI APTVAFKQAN PKAT

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.