Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43526 | Canola | nucleus | 86.12 | 92.83 |
| CDX68587 | Canola | nucleus | 87.64 | 92.38 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 59.13 | 67.9 |
| KRH34879 | Soybean | cytosol | 57.22 | 65.01 |
| Solyc05g056030.2.1 | Tomato | cytosol | 55.32 | 62.45 |
| PGSC0003DMT400060317 | Potato | cytosol | 54.94 | 62.02 |
| AT3G54950.1 | Thale cress | mitochondrion | 56.08 | 60.45 |
| AT2G39220.1 | Thale cress | cytosol | 55.32 | 58.32 |
| GSMUA_Achr2P12330_001 | Banana | cytosol | 43.73 | 57.5 |
| GSMUA_Achr5P18500_001 | Banana | cytosol | 42.02 | 56.96 |
| GSMUA_Achr8P18860_001 | Banana | cytosol | 35.93 | 56.93 |
| KRG91895 | Soybean | cytosol, extracellular, mitochondrion, plastid | 57.6 | 55.7 |
| GSMUA_Achr5P03830_001 | Banana | cytosol | 45.44 | 55.07 |
| TraesCS4B01G221000.1 | Wheat | cytosol | 45.82 | 52.39 |
| TraesCS4D01G221300.1 | Wheat | cytosol | 45.63 | 52.29 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 45.63 | 51.95 |
| GSMUA_Achr11P... | Banana | mitochondrion | 27.76 | 50.69 |
| EER95163 | Sorghum | cytosol | 44.3 | 50.65 |
| Zm00001d028482_P001 | Maize | cytosol | 44.11 | 50.43 |
| Os03t0254400-01 | Rice | cytosol | 44.49 | 49.89 |
| AT3G63200.1 | Thale cress | cytosol | 31.75 | 43.49 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 33.08 | 43.07 |
| AT4G37070.2 | Thale cress | cytosol, peroxisome, plastid | 20.72 | 26.33 |
| AT2G26560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 20.15 | 26.04 |
| AT4G37050.1 | Thale cress | cytosol | 20.34 | 25.0 |
| AT4G37060.2 | Thale cress | cytosol, golgi, plastid | 21.1 | 24.94 |
| AT5G43590.2 | Thale cress | mitochondrion | 19.01 | 21.37 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | EntrezGene:829102 | ProteinID:AEE85678.1 | ArrayExpress:AT4G29800 | EnsemblPlantsGene:AT4G29800 |
| RefSeq:AT4G29800 | TAIR:AT4G29800 | RefSeq:AT4G29800-TAIR-G | EnsemblPlants:AT4G29800.2 | TAIR:AT4G29800.2 | InterPro:Acyl_Trfase/lysoPLipase |
| ProteinID:CAB43655.1 | ProteinID:CAB79738.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:IPR002641 | RefSeq:NP_001190866.1 |
| PFAM:PF01734 | Symbol:PLP8 | InterPro:PNPLA_dom | PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000262 |
| PO:PO:0009005 | PO:PO:0020100 | PFscan:PS51635 | PANTHER:PTHR32241 | SUPFAM:SSF52151 | UniParc:UPI00000AA7E7 |
| SEG:seg | : | : | : | : | : |
Description
PLP8PATATIN-like protein 8 [Source:TAIR;Acc:AT4G29800]
Coordinates
chr4:-:14590645..14592825
Molecular Weight (calculated)
57092.7 Da
IEP (calculated)
9.471
GRAVY (calculated)
-0.374
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRRYEKPPP LSVSSKGKKK HFVNHTAPNT PGNYERTQTS PTLSTARSHE PDDKLNYEIF SILESKFLFG YEDPRLLWIP QSPLRPGDSE AGPSPRSPLT
101: PNGVVLPGTP SSSFRSPRGR ICVLSIDGGG MRGLLAGKSL IYLEQMLKEK SGDPNARIAD YFDVAAGSGV GGVFAAMIFA TRDGNRPIFK AEDTWKFLVE
201: NAEGFYRSGS GSGGGGAGAA IKRVIRSGSG SGSSSVTAAT AKLEKAMKAS FADLTLKDTL KPILISCYDL SSTAPFLFSR ADALESDSFD FRLRDICRAT
301: WAEPGTFDPV RTCSVDGKTR CVAVGGGLAM SNPTAAAITH VFHNKQEFPA VKGVEDLLVL SLGTGQLFEV NYDYEQVKNW RVKEWARPMA RISGDGSAEF
401: VDQAVAMGFG PYRSSNYVRI QQANGSRLGA CGPNVDTDPR AENVKKLTEI ADEMLKQNNV ESVLFGSKRI GEMSNSEKIE WFASELVIEQ QRRSVRASPT
501: VTLKQAVSKT NRNAINATLT LISKDR
101: PNGVVLPGTP SSSFRSPRGR ICVLSIDGGG MRGLLAGKSL IYLEQMLKEK SGDPNARIAD YFDVAAGSGV GGVFAAMIFA TRDGNRPIFK AEDTWKFLVE
201: NAEGFYRSGS GSGGGGAGAA IKRVIRSGSG SGSSSVTAAT AKLEKAMKAS FADLTLKDTL KPILISCYDL SSTAPFLFSR ADALESDSFD FRLRDICRAT
301: WAEPGTFDPV RTCSVDGKTR CVAVGGGLAM SNPTAAAITH VFHNKQEFPA VKGVEDLLVL SLGTGQLFEV NYDYEQVKNW RVKEWARPMA RISGDGSAEF
401: VDQAVAMGFG PYRSSNYVRI QQANGSRLGA CGPNVDTDPR AENVKKLTEI ADEMLKQNNV ESVLFGSKRI GEMSNSEKIE WFASELVIEQ QRRSVRASPT
501: VTLKQAVSKT NRNAINATLT LISKDR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.