Factsheet for TraesCS4D01G221300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G221000.1	Wheat	cytosol	98.04	97.83
TraesCS4A01G083200.1	Wheat	cytosol	98.04	97.4
Zm00001d028482_P001	Maize	cytosol	88.02	87.83
EER95163	Sorghum	cytosol	88.02	87.83
Os03t0254400-01	Rice	cytosol	87.36	85.5
HORVU0Hr1G008670.3	Barley	cytosol	69.28	78.71
GSMUA_Achr2P12330_001	Banana	cytosol	53.38	61.25
GSMUA_Achr5P03830_001	Banana	cytosol	57.3	60.6
GSMUA_Achr5P18500_001	Banana	cytosol	50.54	59.79
GSMUA_Achr8P18860_001	Banana	cytosol	41.39	57.23
GSMUA_Achr11P...	Banana	mitochondrion	35.73	56.94
VIT_13s0019g04200.t01	Wine grape	cytosol	54.47	54.59
KRH34879	Soybean	cytosol	54.9	54.43
PGSC0003DMT400060317	Potato	cytosol	53.16	52.36
Solyc05g056030.2.1	Tomato	cytosol	53.16	52.36
CDX74862	Canola	cytosol	50.54	51.67
CDX67618	Canola	mitochondrion	51.85	51.07
TraesCS5D01G430400.1	Wheat	cytosol	43.57	50.89
Bra003202.1-P	Field mustard	mitochondrion	52.07	50.21
CDY07512	Canola	mitochondrion	51.85	50.11
CDY24974	Canola	cytosol	51.63	49.79
CDX73423	Canola	mitochondrion	52.94	49.49
CDY07662	Canola	cytosol	51.2	49.37
AT3G54950.1	Thale cress	mitochondrion	52.29	49.18
CDY56960	Canola	mitochondrion	52.07	49.18
Bra005058.1-P	Field mustard	cytosol	51.85	48.87
Bra000125.1-P	Field mustard	cytosol	51.42	48.86
Bra007119.1-P	Field mustard	mitochondrion	52.29	48.39
CDY44633	Canola	cytosol	51.2	48.35
CDY43526	Canola	nucleus	50.54	47.54
AT2G39220.1	Thale cress	cytosol	51.63	47.49
CDX68587	Canola	nucleus	51.2	47.09
AT4G29800.2	Thale cress	cytosol	52.29	45.63
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	53.81	45.4
TraesCS5D01G385900.1	Wheat	cytosol	42.27	43.79
TraesCS5D01G430300.1	Wheat	plastid	45.32	43.33
TraesCS7D01G452000.1	Wheat	cytosol	37.25	40.81
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	42.05	40.21
TraesCS4D01G284700.1	Wheat	mitochondrion	26.14	28.44
TraesCS5D01G249800.1	Wheat	cytosol	24.62	27.9
TraesCS7D01G491300.1	Wheat	plastid	15.47	27.63
TraesCS7D01G491900.1	Wheat	plastid	25.05	27.25
TraesCS2D01G166800.1	Wheat	cytosol	22.88	25.86
TraesCS7D01G034300.1	Wheat	mitochondrion	23.09	25.67
TraesCS4D01G285300.1	Wheat	plastid	24.18	25.64
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	23.53	25.59
TraesCS5D01G528100.1	Wheat	cytosol	21.79	25.51
TraesCS3D01G033500.1	Wheat	plastid	23.97	25.4
TraesCS3D01G033200.1	Wheat	plastid	23.97	25.4
TraesCS1D01G302900.1	Wheat	cytosol	22.22	25.19
TraesCS7D01G178600.1	Wheat	cytosol	22.22	25.0
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	21.79	25.0
TraesCS1D01G060500.1	Wheat	cytosol	21.79	24.33
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	21.35	21.83
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	13.73	20.86

Protein Annotations

EnsemblPlants:TraesCS4D01G221300.1	EnsemblPlantsGene:TraesCS4D01G221300	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	TIGR:cd07199	MapMan:5.7.2.2.4	:	:

Description

No Description!

Coordinates

chr4D:-:378449227..378450705

Molecular Weight (calculated)

48786.9 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.164

Length

459 amino acids

Sequence
(BLAST)

001: MEEAEEMQVE RVHEDAEHGG ADADKLNYEI FSILESKFLF GYTDPHQLWL PKPPPPEQAS AAMAVPGKAA QRGKVCVLCV DGGGGGLRAL LAGRALAHLE
101: AALQRASGSP DARVADFFDL AAGTGAGGVF AAMLFSTHSR GAPLFRAEDT WRLVADHAPR LFRRPAGSTS LFCRAKKRPL AAPTAALSAA MKAAFGEELT
201: LRDTIKPVLI SCYDLKSSAP LLFSRADALE SGSYDFRLSD VGRAAWSEPG RFEPAEVASV DGVTSCAAVD GGPTMGSPAA AAITHVLHNK HEFPFVRGVE
301: DLLVLSIGGC SGAGGSGATA DADIMRMRRW GPKEWARPIA RIAADGAADL VDHAVARAFG QCHSSNYLRI QAKRESMPPC GPDGEYDPTQ ANVQALLAAA
401: DETMKQRNVE SVLFEGRRIG EQTNAEKLEW FAAELVAEHR GRGSRIAPTV AFKQSPVLG

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.