CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44633	Canola	cytosol	97.77	90.33
Bra005058.1-P	Field mustard	cytosol	97.33	89.73
CDY07662	Canola	cytosol	90.2	85.08
CDY24974	Canola	cytosol	89.75	84.66
AT2G39220.1	Thale cress	cytosol	86.86	78.16
CDX67618	Canola	mitochondrion	76.39	73.61
CDY07512	Canola	mitochondrion	76.84	72.63
CDY56960	Canola	mitochondrion	77.06	71.19
CDX73423	Canola	mitochondrion	76.84	70.26
VIT_13s0019g04200.t01	Wine grape	cytosol	68.82	67.47
KRH34879	Soybean	cytosol	67.71	65.66
Solyc05g056030.2.1	Tomato	cytosol	65.48	63.09
PGSC0003DMT400060317	Potato	cytosol	65.26	62.88
GSMUA_Achr8P18860_001	Banana	cytosol	44.77	60.54
GSMUA_Achr2P12330_001	Banana	cytosol	53.01	59.5
GSMUA_Achr5P03830_001	Banana	cytosol	57.24	59.22
GSMUA_Achr5P18500_001	Banana	cytosol	50.11	57.99
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	67.71	55.88
CDX68587	Canola	nucleus	61.69	55.51
CDY43526	Canola	nucleus	60.13	55.33
GSMUA_Achr11P...	Banana	mitochondrion	35.41	55.21
EER95163	Sorghum	cytosol	53.45	52.17
Zm00001d028482_P001	Maize	cytosol	53.23	51.96
TraesCS4B01G221000.1	Wheat	cytosol	51.89	50.65
TraesCS4D01G221300.1	Wheat	cytosol	51.67	50.54
Os03t0254400-01	Rice	cytosol	52.78	50.53
TraesCS4A01G083200.1	Wheat	cytosol	51.22	49.78
CDY56455	Canola	cytosol	34.97	42.9
HORVU0Hr1G008670.3	Barley	cytosol	38.08	42.33
CDX76689	Canola	cytosol	35.41	41.3
CDX93922	Canola	cytosol	35.41	41.09
CDX89181	Canola	cytosol	35.41	41.09
CDX75619	Canola	cytosol	25.39	27.94
CDX69270	Canola	cytosol, peroxisome, plastid	24.94	27.65
CDX75620	Canola	cytosol, peroxisome, plastid	24.94	27.65
CDY42720	Canola	cytosol	25.39	27.6
CDX69269	Canola	cytosol	25.39	27.47
CDX72620	Canola	cytosol	25.17	27.43
CDX72619	Canola	cytosol	24.72	27.21
CDX75621	Canola	cytosol	24.05	26.54
CDY21469	Canola	cytosol, peroxisome, vacuole	24.05	26.54
CDX69271	Canola	cytosol	23.61	26.04
CDX83197	Canola	cytosol	23.61	26.04
CDY42719	Canola	cytosol	24.28	15.31

Protein Annotations

EnsemblPlants:CDX74862	EnsemblPlantsGene:GSBRNA2T00116851001	Gene3D:3.40.1090.10	GO:A0A078CDC9	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734
PFscan:PS51635	ProteinID:CDX74862	ProteinID:CDX74862.1	SUPFAM:SSF52151	UniParc:UPI0004EE9582	MapMan:5.7.2.2.4

Description

BnaA05g06080D

Coordinates

chrLK031802:+:1078824..1080698

Molecular Weight (calculated)

49025.3 Da

IEP (calculated)

6.278

GRAVY (calculated)

-0.266

Length

449 amino acids

Sequence
(BLAST)

001: MQRVHNKPVD SIGKSPSGTV KHHLIKQSSG GVTTAAAADM QEPSIDTDKL SYEIFSILES KFLFGYDDTS PEQETSPTTR GKVCVLSIDG GGMRGIIPGK
101: ALAYLEQALK SKSGDPKARI ADYFDVASGS GIGGVFTAML FASSDGDRPI FNADDTWRFL ANNGKRFYKP ASGTGRILNR LEKSMKESFA EMTLKDTLKP
201: VLIPCYDLTS SAPFLFSRAD ALETDGYDFK LWEVCRATWA EPGVFEPVEM RSVDGKTRCV AVDGGLAMSN PTAAAITHVL HNKEEFPFVR GVEDLLVLSL
301: GTGQLVDAKQ WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQADG SSFGPCRPNI DTDASASNVN MLVGVAEEML KQKNVESVMF GGKKISEESN
401: FEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SSDRRTIQKT IFKDIDCMF

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.