Factsheet for GSMUA_Achr8P18860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18500_001	Banana	cytosol	72.29	61.86
GSMUA_Achr11P...	Banana	mitochondrion	49.7	57.29
GSMUA_Achr2P12330_001	Banana	cytosol	65.36	54.25
GSMUA_Achr5P03830_001	Banana	cytosol	66.27	50.69
VIT_13s0019g04200.t01	Wine grape	cytosol	65.36	47.38
KRH34879	Soybean	cytosol	65.06	46.65
CDX74862	Canola	cytosol	60.54	44.77
EER95163	Sorghum	cytosol	61.45	44.35
Zm00001d028482_P001	Maize	cytosol	60.54	43.7
Solyc05g056030.2.1	Tomato	cytosol	61.14	43.56
PGSC0003DMT400060317	Potato	cytosol	61.14	43.56
CDY07662	Canola	cytosol	62.05	43.28
CDY24974	Canola	cytosol	61.75	43.07
Bra000125.1-P	Field mustard	cytosol	62.05	42.65
Os03t0254400-01	Rice	cytosol	59.64	42.22
CDY44633	Canola	cytosol	60.84	41.56
TraesCS4B01G221000.1	Wheat	cytosol	57.53	41.52
CDY07512	Canola	mitochondrion	59.34	41.47
TraesCS4D01G221300.1	Wheat	cytosol	57.23	41.39
TraesCS4A01G083200.1	Wheat	cytosol	57.53	41.34
CDX67618	Canola	mitochondrion	57.83	41.2
Bra005058.1-P	Field mustard	cytosol	60.24	41.07
CDY56960	Canola	mitochondrion	59.34	40.53
Bra003202.1-P	Field mustard	mitochondrion	57.83	40.34
AT3G54950.1	Thale cress	mitochondrion	58.73	39.96
AT2G39220.1	Thale cress	cytosol	59.94	39.88
Bra007119.1-P	Field mustard	mitochondrion	59.04	39.52
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	64.46	39.34
CDX73423	Canola	mitochondrion	57.83	39.1
CDX68587	Canola	nucleus	56.63	37.68
CDY43526	Canola	nucleus	54.52	37.09
GSMUA_AchrUn_...	Banana	cytosol	40.06	36.84
AT4G29800.2	Thale cress	cytosol	56.93	35.93
GSMUA_Achr5P26630_001	Banana	cytosol	35.24	33.91
GSMUA_Achr11P...	Banana	cytosol	27.41	32.5
GSMUA_Achr8P07160_001	Banana	cytosol	36.75	32.28
HORVU0Hr1G008670.3	Barley	cytosol	38.86	31.93
GSMUA_Achr5P02370_001	Banana	cytosol	36.75	31.04
GSMUA_Achr2P01360_001	Banana	cytosol	35.54	29.57
GSMUA_Achr6P31310_001	Banana	cytosol	39.46	27.87
GSMUA_AchrUn_...	Banana	plastid	29.52	22.27
GSMUA_Achr4P31750_001	Banana	cytosol	43.07	20.97
GSMUA_Achr7P11810_001	Banana	cytosol	25.3	20.69
GSMUA_Achr10P...	Banana	cytosol	25.0	20.65
GSMUA_Achr2P22340_001	Banana	cytosol	23.19	18.55
GSMUA_Achr6P02240_001	Banana	cytosol	22.89	18.4
GSMUA_Achr7P18980_001	Banana	plastid	22.29	17.92
GSMUA_Achr3P06850_001	Banana	cytosol	21.99	17.89
GSMUA_Achr3P20370_001	Banana	cytosol	21.99	17.63
GSMUA_Achr9P27010_001	Banana	cytosol	22.29	17.25
GSMUA_Achr7P12940_001	Banana	cytosol	23.8	16.6
GSMUA_Achr11P...	Banana	cytosol	14.76	14.5

Protein Annotations

EnsemblPlants:GSMUA_Achr8P18860_001	EnsemblPlants:GSMUA_Achr8T18860_001	EnsemblPlantsGene:GSMUA_Achr8G18860_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000296075A	UniProt:M0TRN9	MapMan:35.1	:

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G18860_001]

Coordinates

chr8:-:23773700..23776191

Molecular Weight (calculated)

36512.2 Da

IEP (calculated)

6.266

GRAVY (calculated)

-0.309

Length

332 amino acids

Sequence
(BLAST)

001: MLVPTHQWRR YGDEAATAAE EDPSIDTDKL SYEIFSILES KFLFGYDDHK LWIPTAPPPA ATVCVLCLDG GGGCGMRGIL PGKALAYLEQ ALKTKSGDHD
101: ARISDYFDVA AGAGVGGVFA AMLFATRDGA RPLFHADDTW RFLADQGKRL FRKGSPSSSS AMKEAFGESL TLRDTSESFD FRLWEQEFPF VRGVEDLMEW
201: ARPISRIAAD GSADLVDQAV ALAFGQCRSS NYVRVQADAS SMGRCSAEVD YDARPVTVKV LSETAEEMLR QKNVESVLFG GKRVRGQTNM EKLDWLAGEL
301: VLEHRRRSCR IAPTVALKRA HPPKSATTSK QS

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.