Factsheet for HORVU0Hr1G008670.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G221000.1	Wheat	cytosol	78.96	69.35
TraesCS4D01G221300.1	Wheat	cytosol	78.71	69.28
TraesCS4A01G083200.1	Wheat	cytosol	78.96	69.05
Zm00001d028482_P001	Maize	cytosol	74.01	65.0
EER95163	Sorghum	cytosol	73.76	64.78
Os03t0254400-01	Rice	cytosol	73.51	63.33
GSMUA_Achr5P03830_001	Banana	cytosol	48.02	44.7
GSMUA_Achr2P12330_001	Banana	cytosol	42.57	43.0
GSMUA_Achr5P18500_001	Banana	cytosol	41.09	42.78
GSMUA_Achr11P...	Banana	mitochondrion	29.21	40.97
VIT_13s0019g04200.t01	Wine grape	cytosol	45.79	40.39
KRH34879	Soybean	cytosol	45.3	39.52
GSMUA_Achr8P18860_001	Banana	cytosol	31.93	38.86
Solyc05g056030.2.1	Tomato	cytosol	44.06	38.2
CDX74862	Canola	cytosol	42.33	38.08
PGSC0003DMT400060317	Potato	cytosol	43.81	37.98
CDY24974	Canola	cytosol	43.07	36.55
CDX67618	Canola	mitochondrion	42.08	36.48
CDY07662	Canola	cytosol	42.57	36.13
Bra005058.1-P	Field mustard	cytosol	43.32	35.93
Bra003202.1-P	Field mustard	mitochondrion	42.33	35.92
Bra000125.1-P	Field mustard	cytosol	42.82	35.82
CDY07512	Canola	mitochondrion	42.08	35.79
CDY44633	Canola	cytosol	42.82	35.6
AT2G39220.1	Thale cress	cytosol	43.81	35.47
AT3G54950.1	Thale cress	mitochondrion	42.33	35.04
CDX73423	Canola	mitochondrion	42.57	35.03
CDY56960	Canola	mitochondrion	41.83	34.77
CDY43526	Canola	nucleus	41.83	34.63
Bra007119.1-P	Field mustard	mitochondrion	42.08	34.27
CDX68587	Canola	nucleus	42.33	34.27
AT4G29800.2	Thale cress	cytosol	43.07	33.08
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	44.31	32.9
HORVU5Hr1G093250.4	Barley	cytosol	34.9	31.33
HORVU5Hr1G103060.1	Barley	mitochondrion	35.89	30.53
HORVU5Hr1G011400.6	Barley	mitochondrion	31.44	28.35
HORVU4Hr1G019140.24	Barley	cytosol	14.85	27.65
HORVU7Hr1G113030.2	Barley	plastid	17.08	26.44
HORVU7Hr1G106600.4	Barley	cytosol	16.09	25.29
HORVU2Hr1G037280.1	Barley	cytosol	16.09	25.19
HORVU5Hr1G069130.5	Barley	cytosol	23.02	22.96
HORVU4Hr1G074970.1	Barley	mitochondrion	23.76	22.75
HORVU5Hr1G119810.5	Barley	cytosol	19.8	20.73
HORVU4Hr1G075070.7	Barley	plastid	22.28	20.69
HORVU1Hr1G012140.1	Barley	plastid	20.79	20.59
HORVU7Hr1G113080.1	Barley	cytosol	23.51	20.34
HORVU2Hr1G029000.2	Barley	cytosol	20.3	19.9
HORVU1Hr1G069200.2	Barley	cytosol	19.8	19.7
HORVU5Hr1G119820.1	Barley	plastid	19.31	19.65
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	9.65	19.4
HORVU7Hr1G006840.3	Barley	cytosol	13.86	19.31
HORVU7Hr1G036460.1	Barley	plasma membrane	20.79	18.38
HORVU3Hr1G004220.4	Barley	cytosol, plastid	21.53	18.12
HORVU6Hr1G001990.1	Barley	cytosol	19.55	17.56
HORVU4Hr1G050060.10	Barley	plastid	10.89	17.05
HORVU2Hr1G060260.1	Barley	plastid	11.14	16.36
HORVU6Hr1G027900.2	Barley	cytosol	13.37	15.74
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	20.05	14.39
HORVU2Hr1G126570.1	Barley	extracellular	8.66	9.8

Protein Annotations

EnsemblPlants:HORVU0Hr1G008670.3	EnsemblPlantsGene:HORVU0Hr1G008670	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF3	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B483B9E	UniProt:A0A287DXV5	MapMan:5.7.2.2.4	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287DXV5]

Coordinates

chrchrUn:+:51808848..51810219

Molecular Weight (calculated)

34862.6 Da

IEP (calculated)

8.583

GRAVY (calculated)

0.008

Length

404 amino acids

Sequence
(BLAST)

001: GGGDTXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF GYTDPQQLWL PKPAAAQASQ AVPGKAAQRG KVCVLCVDGG GGGLRALLAG RALAHLEAAL
101: QRASGSPDAR VADYFDLAAG TGAGGVFAAM LFSTHSRGAP LFRAEDTWRL VADHAPRLFR RPAGSTSLFC RAKKRPLAAP TAALGVAMKA AFGEELTLRD
201: TIKPVLISCY DLRSSAPLLF SRADALESES YDFRLSDVGR AAWSEPGRFE PAEVASVDGV TSCAAVDGGP TMGSPAAAAI THVLHNKHEF PFVRGVEDLL
301: VLSIGGCSGA GGSGATADAD IMRMRRWGPK EWARPIARIA ADGAADLVDH AVARAFGQCX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPCVGVPL
401: KRKG

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.