Factsheet for HORVU5Hr1G103060.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G423900.1	Wheat	cytosol	88.84	95.05
TraesCS5A01G422000.1	Wheat	cytosol	87.79	94.56
TraesCS5B01G424100.1	Wheat	cytosol	75.37	91.09
TraesCS5D01G430400.1	Wheat	cytosol	75.16	90.84
TraesCS5D01G430300.1	Wheat	plastid	91.58	90.62
TraesCS5A01G422200.1	Wheat	cytosol	75.58	89.97
Os03t0784100-00	Rice	cytosol	73.89	74.68
Zm00001d034340_P001	Maize	cytosol	67.58	73.29
EER90785	Sorghum	cytosol	68.42	72.38
GSMUA_Achr11P...	Banana	cytosol	33.68	57.14
GSMUA_Achr8P07160_001	Banana	cytosol	45.47	57.14
GSMUA_Achr5P26630_001	Banana	cytosol	37.68	51.88
KRH11757	Soybean	cytosol	46.32	50.93
GSMUA_Achr2P01360_001	Banana	cytosol	42.53	50.63
KRH36757	Soybean	cytosol	45.89	50.23
HORVU5Hr1G093250.4	Barley	cytosol	47.58	50.22
VIT_10s0092g00150.t01	Wine grape	cytosol	44.84	49.88
PGSC0003DMT400060932	Potato	cytosol	44.63	49.42
Solyc10g080690.1.1	Tomato	cytosol	44.21	48.61
PGSC0003DMT400021555	Potato	cytosol	44.21	48.28
Solyc10g078530.1.1	Tomato	cytosol	43.37	47.36
HORVU5Hr1G011400.6	Barley	mitochondrion	43.79	46.43
HORVU7Hr1G106600.4	Barley	cytosol	21.05	38.91
HORVU0Hr1G008670.3	Barley	cytosol	30.53	35.89
HORVU5Hr1G069130.5	Barley	cytosol	23.58	27.65
HORVU7Hr1G113030.2	Barley	plastid	14.74	26.82
HORVU4Hr1G074970.1	Barley	mitochondrion	23.37	26.3
HORVU4Hr1G019140.24	Barley	cytosol	12.0	26.27
HORVU5Hr1G119810.5	Barley	cytosol	21.26	26.17
HORVU2Hr1G037280.1	Barley	cytosol	13.68	25.19
HORVU5Hr1G119820.1	Barley	plastid	20.84	24.94
HORVU2Hr1G029000.2	Barley	cytosol	21.26	24.51
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	10.11	23.88
HORVU1Hr1G012140.1	Barley	plastid	20.42	23.77
HORVU1Hr1G069200.2	Barley	cytosol	19.79	23.15
HORVU4Hr1G075070.7	Barley	plastid	20.84	22.76
HORVU7Hr1G113080.1	Barley	cytosol	21.89	22.27
HORVU4Hr1G050060.10	Barley	plastid	12.0	22.09
HORVU7Hr1G036460.1	Barley	plasma membrane	20.63	21.44
HORVU7Hr1G006840.3	Barley	cytosol	13.05	21.38
HORVU6Hr1G001990.1	Barley	cytosol	20.0	21.11
HORVU2Hr1G060260.1	Barley	plastid	12.21	21.09
HORVU3Hr1G004220.4	Barley	cytosol, plastid	21.26	21.04
HORVU6Hr1G027900.2	Barley	cytosol	13.68	18.95
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	20.0	16.87
HORVU2Hr1G126570.1	Barley	extracellular	8.42	11.2

Protein Annotations

EnsemblPlants:HORVU5Hr1G103060.1	EnsemblPlantsGene:HORVU5Hr1G103060	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B475569	UniProt:A0A287SIN2	MapMan:5.7.2.2.4	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287SIN2]

Coordinates

chrchr5H:-:614888007..614889774

Molecular Weight (calculated)

49211.5 Da

IEP (calculated)

8.902

GRAVY (calculated)

-0.049

Length

475 amino acids

Sequence
(BLAST)

001: TPAPRAHTAE RTTPPLSFVR ARAPAGVDHR MEQAPAGPAA AMDVDKLTYE IFSILESKFL FGYDDPKLLF AGGSPHTPPA AAKDTPPRVQ AGKVCILSID
101: GGGRAADGLL AGAALVRLEA SLRRRTGDPK ARLADFFDVA AGSGAGGVLA AMLVARGKDD ARPLYSAEDA LAFLVRSLRR GWSSSSGSLR ALLRRPAGGA
201: AFRKVFGDLT LRDTARPVLV PCYDLATGGP FLFSRADAVE NPAYDFRLRD VCAATCAGSD RSSSAVEVRS CDGSTRIVAV GGGVALGNPT AAAITHVLNN
301: KREFPLASGV EDLLVISIGS GEGEQRPAAG TGGASTSEIV RIAAEGVSDM VDQAVAMAFG HNRTSNYTRI QAMGSPRGGR CAAAAAKGCV AAEEMLSQKN
401: VESVLFCGKK LAEQTNAEKL ERFAHELVKE RDRRGSSALG AAAPAVVKQQ AAAAAGDAAP ASYSNLVSQM FTSIL

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.