Factsheet for HORVU4Hr1G074970.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G286000.1	Wheat	mitochondrion	95.26	95.04
TraesCS4A01G018100.1	Wheat	cytosol	94.79	94.79
TraesCS4D01G284700.1	Wheat	mitochondrion	93.36	93.36
Os03t0393900-01	Rice	mitochondrion	81.04	79.17
Zm00001d029412_P001	Maize	mitochondrion	77.01	75.93
EER94748	Sorghum	mitochondrion	77.96	75.29
HORVU1Hr1G012140.1	Barley	plastid	52.61	54.41
HORVU1Hr1G069200.2	Barley	cytosol	51.9	53.94
HORVU2Hr1G037280.1	Barley	cytosol	31.99	52.33
HORVU5Hr1G119810.5	Barley	cytosol	47.63	52.07
HORVU7Hr1G113030.2	Barley	plastid	31.99	51.72
HORVU5Hr1G069130.5	Barley	cytosol	49.29	51.36
HORVU4Hr1G075070.7	Barley	plastid	52.61	51.03
HORVU2Hr1G029000.2	Barley	cytosol	48.58	49.76
HORVU5Hr1G119820.1	Barley	plastid	46.21	49.12
HORVU7Hr1G036460.1	Barley	plasma membrane	51.66	47.7
HORVU3Hr1G004220.4	Barley	cytosol, plastid	51.66	45.42
HORVU6Hr1G027900.2	Barley	cytosol	36.73	45.19
HORVU7Hr1G113080.1	Barley	cytosol	50.0	45.18
HORVU4Hr1G019140.24	Barley	cytosol	22.51	43.78
HORVU7Hr1G006840.3	Barley	cytosol	29.86	43.45
HORVU2Hr1G060260.1	Barley	plastid	27.73	42.55
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	20.14	42.29
HORVU4Hr1G050060.10	Barley	plastid	25.59	41.86
HORVU6Hr1G001990.1	Barley	cytosol	34.12	32.0
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	39.81	29.84
HORVU0Hr1G008670.3	Barley	cytosol	22.75	23.76
HORVU5Hr1G103060.1	Barley	mitochondrion	26.3	23.37
HORVU5Hr1G093250.4	Barley	cytosol	23.93	22.44
HORVU2Hr1G126570.1	Barley	extracellular	18.01	21.29
HORVU5Hr1G011400.6	Barley	mitochondrion	22.04	20.76
HORVU7Hr1G106600.4	Barley	cytosol	10.66	17.51

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:AK375146	InterPro:Acyl_Trfase/lysoPLipase	UniProt:F2EG69	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	EnsemblPlantsGene:HORVU4Hr1G074970	EnsemblPlants:HORVU4Hr1G074970.1	InterPro:IPR002641	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	SUPFAM:SSF52151	UniParc:UPI00020089C1	SEG:seg

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:F2EG69]

Coordinates

chrchr4H:+:596060795..596064156

Molecular Weight (calculated)

46172.7 Da

IEP (calculated)

9.320

GRAVY (calculated)

-0.213

Length

422 amino acids

Sequence
(BLAST)

001: MASYWCRRPC ESCSTRAMAG SVVGQPVAPG QRVTVLTIDG GGIRGLIPGT ILAFLEARLQ ELDGPDARLA DYFDCIAGTS TGGLITAMLT APGQDGRPLF
101: AAKDVNRFYL DNGPYIFPQR RCALAAVTAS LRRPRYSGKY LHGKIRSMLG ETRLCDALTD VVIPTFDVKL LQPIIFSTYD ARNMPLKNAR LADICIGTSA
201: APTYLPAHHF HTQDDNGKER EYNLIDGGVA ANNPTMVTMT QITKKMMVKD REELYPVKPS DCGKFLVLSI GTGSTSDQGL YTAKQCSQWG IIRWLRNKGM
301: APIIDIFMAA SSDLVDIHAA VLFQSLHSDG NYLRIQDNSL HGPAATVDAA TPENMAELLR IGERMLAQRV SRVNVETGRY EEIRGAGSNA DALAGFAKQL
401: SDERRTRLGR RRVGAGRLKS RR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.