Factsheet for Os03t0393900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G074970.1	Barley	mitochondrion	79.17	81.04
TraesCS4A01G018100.1	Wheat	cytosol	78.7	80.57
TraesCS4B01G286000.1	Wheat	mitochondrion	78.24	79.91
TraesCS4D01G284700.1	Wheat	mitochondrion	77.78	79.62
EER94748	Sorghum	mitochondrion	77.31	76.43
Zm00001d029412_P001	Maize	mitochondrion	75.69	76.4
Os11t0614400-01	Rice	plasma membrane	52.31	54.2
Os11t0614500-02	Rice	cytosol	30.56	53.88
Os09t0462400-00	Rice	cytosol	42.36	53.51
Os12t0552200-01	Rice	cytosol, nucleus, plastid	54.86	53.02
Os08t0477500-01	Rice	plasma membrane	32.87	52.79
Os08t0376500-00	Rice	plastid	31.25	51.92
Os08t0476900-01	Rice	plastid	50.23	50.47
Os08t0477100-01	Rice	plastid	49.77	49.88
Os08t0376550-00	Rice	cytosol	20.6	49.17
Os01t0898500-01	Rice	plastid	42.82	45.01
Os03t0254400-01	Rice	cytosol	26.62	24.52
Os03t0640000-00	Rice	cytosol	24.07	23.58
Os03t0784100-00	Rice	cytosol	25.0	22.98
Os06t0677000-00	Rice	plastid	21.3	19.13
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	21.06	17.43
Os07t0144500-00	Rice	mitochondrion, plastid	16.67	17.31

Protein Annotations

Gene3D:3.40.1090.10	EntrezGene:4333030	MapMan:5.7.2.2.3	ProteinID:AAP04195.1	ProteinID:ABF96398.1	InterPro:Acyl_Trfase/lysoPLipase
ProteinID:BAF12201.1	ProteinID:BAS84548.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006098
GO:GO:0006139	GO:GO:0006629	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009045	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016042
GO:GO:0016787	GO:GO:0016853	GO:GO:0042732	GO:GO:0046872	GO:GO:0047372	InterPro:IPR002641
EnsemblPlantsGene:Os03g0393900	EnsemblPlants:Os03t0393900-01	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF5	UniProt:Q84QY3	SUPFAM:SSF52151	UniParc:UPI000018CEE4	RefSeq:XP_015630145.1	SEG:seg

Description

Patatin-related phospholipase A II betaSimilar to S.tuberosum patatin (Fragment). (Os03t0393900-01)

Coordinates

chr3:+:15836613..15838422

Molecular Weight (calculated)

46403.0 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.113

Length

432 amino acids

Sequence
(BLAST)

001: MAASYSCRRT CEACSTRAMA GCVVGEPASA PGQRVTLLAI DGGGIRGLIP GTILAFLEAR LQELDGPDAR LADYFDCIAG TSTGGLITAM LAAPGDHGRP
101: LFAASDINRF YLDNGPLIFP QKRCGMAAAM AALTRPRYNG KYLQGKIRKM LGETRVRDTL TNVVIPTFDV RLLQPTIFST YDAKSMPLKN ALLSDICIST
201: SAAPTYLPAH CFQTTDDATG KVREFDLIDG GVAANNPTMV AMTQITKKIM VKDKEELYPV KPSDCGKFLV LSVGTGSTSD QGMYTARQCS RWGIVRWLRN
301: KGMAPIIDIF MAASSDLVDI HAAVMFQSLH SDGDYLRIQD NTLHGDAATV DAATRDNMRA LVGIGERMLA QRVSRVNVET GRYVEVPGAG SNADALRGFA
401: RQLSEERRAR LGRRNACGGG GEGEPSGVAC KR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.