Factsheet for Os03t0640000-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385900.1	Wheat	cytosol	80.05	79.68
TraesCSU01G072800.1	Wheat	cytosol	79.37	79.55
Zm00001d033254_P001	Maize	cytosol	77.1	79.25
HORVU5Hr1G093250.4	Barley	cytosol	79.59	78.0
EER93762	Sorghum	plastid	77.1	76.4
Zm00001d000203_P001	Maize	cytosol	76.64	75.96
EER91181	Sorghum	plastid	79.37	75.92
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.38	75.58
Zm00001d033256_P001	Maize	cytosol	74.83	74.49
TraesCS5B01G379300.1	Wheat	plastid	79.37	72.16
GSMUA_Achr8P07160_001	Banana	cytosol	44.67	52.12
GSMUA_Achr11P...	Banana	cytosol	32.65	51.43
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	60.09	50.77
Os03t0784100-00	Rice	cytosol	52.38	49.15
GSMUA_Achr2P01360_001	Banana	cytosol	44.22	48.87
KRH11757	Soybean	cytosol	47.17	48.15
GSMUA_Achr5P26630_001	Banana	cytosol	37.64	48.12
KRH36757	Soybean	cytosol	46.71	47.47
VIT_10s0092g00150.t01	Wine grape	cytosol	44.9	46.37
PGSC0003DMT400021555	Potato	cytosol	43.99	44.6
PGSC0003DMT400060932	Potato	cytosol	43.31	44.52
Solyc10g080690.1.1	Tomato	cytosol	43.31	44.21
Solyc10g078530.1.1	Tomato	cytosol	43.31	43.91
Os03t0254400-01	Rice	cytosol	44.22	41.58
Os06t0677000-00	Rice	plastid	44.67	40.96
Os07t0144500-00	Rice	mitochondrion, plastid	32.88	34.86
Os08t0376500-00	Rice	plastid	16.55	28.08
Os11t0614500-02	Rice	cytosol	13.83	24.9
Os08t0477500-01	Rice	plasma membrane	14.97	24.54
Os03t0393900-01	Rice	mitochondrion	23.58	24.07
Os11t0614400-01	Rice	plasma membrane	22.68	23.98
Os09t0462400-00	Rice	cytosol	18.14	23.39
Os08t0477100-01	Rice	plastid	22.68	23.2
Os01t0898500-01	Rice	plastid	20.63	22.14
Os08t0476900-01	Rice	plastid	21.54	22.09
Os12t0552200-01	Rice	cytosol, nucleus, plastid	20.41	20.13
Os08t0376550-00	Rice	cytosol	8.16	19.89

Protein Annotations

Gene3D:3.40.1090.10	EntrezGene:4333539	MapMan:5.7.2.2.4	ProteinID:AAT85288.1	ProteinID:ABF97822.1	InterPro:Acyl_Trfase/lysoPLipase
ProteinID:BAF12654.1	ProteinID:BAS85422.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	EnsemblPlantsGene:Os03g0640000
EnsemblPlants:Os03t0640000-00	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4
UniProt:Q6ASS6	SUPFAM:SSF52151	UniParc:UPI0000401DDD	RefSeq:XP_015630000.1	SEG:seg	:

Description

Patatin-related phospholipase A III betaPatatin family protein. (Os03t0640000-00)

Coordinates

chr3:-:24616417..24617859

Molecular Weight (calculated)

45150.5 Da

IEP (calculated)

9.270

GRAVY (calculated)

0.003

Length

441 amino acids

Sequence
(BLAST)

001: MASSPMAMDA DKLSYEIFSL LESKFLFGAG GGGCLSSGPC TPARPFLGGG GGMDGRVRVL AIDGCGSSGA GDALLAAAAL ARLEAGLRKR TGDSDARVAD
101: FFDVAAGAGA GGVLAAMLFL RGPDGRPRYT AEEALEFVAA SVGRDWAGRR GRWARLFRGG ARGAERSFRR VFGDATLKDT VAPLLVPCYD LATAAPFMFS
201: RADAVESDSY DFALRDVCAA TCAAGSTAAA VRSVDGRTAI AAASGGVAAM GNPAAAAITH VLHNKQEFPL ATTVDDILVL SIGTGASTSA TATPMPTRSP
301: SPREMARVTA EGVADMVDES VAMAFGHTSG SSSNYVRIQA SKAATALHGA AAAGAMLSQR NVESVLFRGR RMSERTNAEK VDAAAAEVVK EHERRRRSPL
401: PNVVIKQVGT PRVSSATTAS SGTARTAAST LASPASYGSR Q

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.