CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93762	Sorghum	plastid	80.18	78.2
EER91181	Sorghum	plastid	82.72	77.87
Zm00001d033256_P001	Maize	cytosol	78.11	76.52
TraesCSU01G072800.1	Wheat	cytosol	75.81	74.77
TraesCS5D01G385900.1	Wheat	cytosol	76.27	74.72
Os03t0640000-00	Rice	cytosol	75.58	74.38
HORVU5Hr1G093250.4	Barley	cytosol	75.58	72.89
TraesCS5B01G379300.1	Wheat	plastid	75.81	67.84
OQU79585	Sorghum	cytosol	70.28	63.02
GSMUA_Achr8P07160_001	Banana	cytosol	45.16	51.85
EER90785	Sorghum	cytosol	51.38	49.67
GSMUA_Achr11P...	Banana	cytosol	32.03	49.64
GSMUA_Achr2P01360_001	Banana	cytosol	45.16	49.12
GSMUA_Achr5P26630_001	Banana	cytosol	38.94	48.99
KRH36757	Soybean	cytosol	45.62	45.62
KRH11757	Soybean	cytosol	45.39	45.6
VIT_10s0092g00150.t01	Wine grape	cytosol	43.32	44.03
EER97967	Sorghum	nucleus	49.77	43.9
EER95163	Sorghum	cytosol	45.62	43.04
PGSC0003DMT400021555	Potato	cytosol	43.09	42.99
Solyc10g078530.1.1	Tomato	cytosol	42.63	42.53
Solyc10g080690.1.1	Tomato	cytosol	41.94	42.13
PGSC0003DMT400060932	Potato	cytosol	41.47	41.96
EER90215	Sorghum	plastid	44.01	40.55
OQU84037	Sorghum	cytosol, extracellular, plastid	8.29	37.11
KXG35787	Sorghum	cytosol	21.43	23.66
EER94748	Sorghum	mitochondrion	23.5	23.34
OQU80645	Sorghum	cytosol	21.43	23.19
OQU88041	Sorghum	cytosol	21.43	22.52
KXG25325	Sorghum	plastid	22.58	22.43
EES08840	Sorghum	cytosol	20.74	22.22
EER99713	Sorghum	cytosol	20.51	22.08
EES10106	Sorghum	plastid	20.51	21.71
EES08841	Sorghum	cytosol	20.51	21.55
EES15134	Sorghum	plastid	20.28	20.23
EES10271	Sorghum	cytosol	15.44	19.03
OQU80643	Sorghum	cytosol	20.97	18.5
OQU83677	Sorghum	cytosol	9.45	12.31

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1Z5S5S4	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:IPR002641	EnsemblPlants:OQU91280	ProteinID:OQU91280	ProteinID:OQU91280.1	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	EnsemblPlantsGene:SORBI_3001G158200	SUPFAM:SSF52151	UniParc:UPI000B8BA8BA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:12825156..12826460

Molecular Weight (calculated)

45062.5 Da

IEP (calculated)

8.893

GRAVY (calculated)

0.018

Length

434 amino acids

Sequence
(BLAST)

001: MGVVDKLSYE IFSLLESKFL FGAAGTPARA FLDGGRVRVL AIDGCGAGAG AEDALLAAAA LARLEAGLRE QAGDPDARVA DFFDVAAGAG AGAVLAAMLF
101: LRGPDGRPRY TAQKALAFVA GSVGRRKDWC GRRGRWAKLF RGGSRGGDRM LRGVLGDATL RDTVAPLLVP CYDLATAAPF VFSRADAVES DSFDFRLRDV
201: CAATCADRGA GALADVRSVD GVTAIAAACA GVAAMGNPAA AAVTHVLHNK LEFPLAASVE DILVFSIGTG SSTTVSSGPP NTPVPPTRAP SQRELARVAA
301: EGVADMVDES VAMAFGDACG SNYVRIQAGR KSTAPLHAET AAAAAEAMLA QRNVESVLFR GRRLSERTNA EKVDTLVAEL VKEQERRRSS PFPNVAIKQV
401: ATRRLSSATT ASSGTTTART TSSMPSPASW DSRR

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.