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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, plastid
Any Predictor:cytosol, extracellular, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042041_P001 Maize cytosol 57.73 14.78
OQU80645 Sorghum cytosol 60.82 14.71
EER99713 Sorghum cytosol 60.82 14.64
EES08841 Sorghum cytosol 60.82 14.29
KXG35787 Sorghum cytosol 57.73 14.25
EES10106 Sorghum plastid 58.76 13.9
EER94748 Sorghum mitochondrion 61.86 13.73
KXG25325 Sorghum plastid 61.86 13.73
EES08840 Sorghum cytosol 55.67 13.33
OQU88041 Sorghum cytosol 56.7 13.32
EES15134 Sorghum plastid 58.76 13.1
OQU80643 Sorghum cytosol 60.82 11.99
TraesCS7A01G012900.1 Wheat cytosol 53.61 9.47
HORVU2Hr1G126660.1 Barley cytosol, nucleus 54.64 9.41
EER91181 Sorghum plastid 40.21 8.46
EER93762 Sorghum plastid 38.14 8.31
OQU91280 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 37.11 8.29
EER90785 Sorghum cytosol 38.14 8.24
EER95163 Sorghum cytosol 38.14 8.04
OQU79585 Sorghum cytosol 39.18 7.85
EER90215 Sorghum plastid 37.11 7.64
EER97967 Sorghum nucleus 37.11 7.32
EES10271 Sorghum cytosol 9.28 2.56
OQU83677 Sorghum cytosol 3.09 0.9
HORVU2Hr1G126570.1 Barley extracellular 0.0 0.0
Protein Annotations
Gene3D:3.40.1090.10MapMan:35.1UniProt:A0A1Z5RK45InterPro:Acyl_Trfase/lysoPLipaseGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016787
InterPro:IPR002641EnsemblPlants:OQU84037ProteinID:OQU84037ProteinID:OQU84037.1PFAM:PF01734InterPro:PNPLA_dom
PFscan:PS51635PANTHER:PTHR32176PANTHER:PTHR32176:SF10EnsemblPlantsGene:SORBI_3005G219100SUPFAM:SSF52151UniParc:UPI000B8BA47C
Description
hypothetical protein
Coordinates
chr5:-:70557081..70557858
Molecular Weight (calculated)
10358.8 Da
IEP (calculated)
6.767
GRAVY (calculated)
0.229
Length
97 amino acids
Sequence
(BLAST)
1: MESNTVLMAL PPAQQGRVLT VLSIDGGGIR GIIPATILAR LETLLQRIDG QDARIADYFD FIAGTSTGGL ITAMLSAPGK DKRPLFAAKE INQFMLN
Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.