CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028482_P001	Maize	cytosol	96.09	96.09
Os03t0254400-01	Rice	cytosol	89.78	88.06
TraesCS4D01G221300.1	Wheat	cytosol	87.83	88.02
TraesCS4A01G083200.1	Wheat	cytosol	87.61	87.23
TraesCS4B01G221000.1	Wheat	cytosol	86.96	86.96
HORVU0Hr1G008670.3	Barley	cytosol	64.78	73.76
GSMUA_Achr5P03830_001	Banana	cytosol	60.0	63.59
GSMUA_Achr2P12330_001	Banana	cytosol	55.22	63.5
GSMUA_Achr5P18500_001	Banana	cytosol	53.48	63.4
GSMUA_Achr8P18860_001	Banana	cytosol	44.35	61.45
GSMUA_Achr11P...	Banana	mitochondrion	38.04	60.76
KRH34879	Soybean	cytosol	57.61	57.24
VIT_13s0019g04200.t01	Wine grape	cytosol	56.52	56.77
CDX74862	Canola	cytosol	52.17	53.45
Solyc05g056030.2.1	Tomato	cytosol	54.13	53.43
PGSC0003DMT400060317	Potato	cytosol	54.13	53.43
CDX67618	Canola	mitochondrion	52.83	52.15
CDY24974	Canola	cytosol	53.91	52.1
CDY07662	Canola	cytosol	53.48	51.68
CDY07512	Canola	mitochondrion	53.26	51.58
Bra003202.1-P	Field mustard	mitochondrion	53.26	51.47
Bra000125.1-P	Field mustard	cytosol	53.7	51.14
Bra005058.1-P	Field mustard	cytosol	53.91	50.92
AT3G54950.1	Thale cress	mitochondrion	53.7	50.61
CDX73423	Canola	mitochondrion	53.91	50.51
CDY44633	Canola	cytosol	53.04	50.21
CDY56960	Canola	mitochondrion	53.04	50.21
Bra007119.1-P	Field mustard	mitochondrion	53.48	49.6
AT2G39220.1	Thale cress	cytosol	53.26	49.1
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	56.74	47.98
CDY43526	Canola	nucleus	49.35	46.52
CDX68587	Canola	nucleus	50.43	46.49
EER90785	Sorghum	cytosol	45.22	46.33
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.04	45.62
AT4G29800.2	Thale cress	cytosol	50.65	44.3
EER93762	Sorghum	plastid	42.61	44.04
EER91181	Sorghum	plastid	44.13	44.03
OQU79585	Sorghum	cytosol	43.48	41.32
OQU84037	Sorghum	cytosol, extracellular, plastid	8.04	38.14
EER97967	Sorghum	nucleus	40.43	37.8
EER90215	Sorghum	plastid	37.17	36.31
EER94748	Sorghum	mitochondrion	25.22	26.54
KXG35787	Sorghum	cytosol	22.39	26.21
OQU80645	Sorghum	cytosol	22.83	26.18
KXG25325	Sorghum	plastid	24.57	25.86
EER99713	Sorghum	cytosol	22.61	25.81
EES15134	Sorghum	plastid	23.04	24.37
EES08841	Sorghum	cytosol	21.74	24.21
EES08840	Sorghum	cytosol	21.3	24.2
EES10106	Sorghum	plastid	21.52	24.15
OQU88041	Sorghum	cytosol	21.3	23.73
OQU80643	Sorghum	cytosol	22.83	21.34
EES10271	Sorghum	cytosol	15.43	20.17
OQU83677	Sorghum	cytosol	10.22	14.11

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EntrezGene:8054325	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5WQV3	EnsemblPlants:EER95163
ProteinID:EER95163	ProteinID:EER95163.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	EnsemblPlantsGene:SORBI_3001G433900	SUPFAM:SSF52151	UniParc:UPI0001A8322D
RefSeq:XP_002468165.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:71236722..71238730

Molecular Weight (calculated)

48990.9 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.245

Length

460 amino acids

Sequence
(BLAST)

001: MDDAEEMQVE RLQEEADAGG ADTDKLSYEI FSILESKFLF GYTDPHQLWL PKPPTPQASA AAPGKPSAAA QRGKVCVLCV DGGGGGLRAL LAGRALAHLE
101: AALRRASGDP DARVADYFDL AAGTGAGGVF AAMLFSTHSR GAPLFHADDT WRLVADHAPR MFRRPGSSSS TSLFCRGKKR PLAAPTAALE AAMKSAFGEE
201: LTLRDTIKPV LISCYDLKTS APLVFSRADA LENESYDFRL CEVGRAAWSE AGRFEPAEVA SVDGATSCAA VDGGPTMGSP AAAAITHVLH NKHEFPFVRG
301: VEDLLVLSIG GCSGGGSGAA GEAELRRMRR WGPKEWARPI ARIAADGAAD LVDHAVARAF GQCRSSNYLR IQAKRESMPP CGPDGEYDPS PGNVRALLAA
401: ADEMLKQRNV ESVLFEGRRV GEQTNAEKLD WFAAELVAEH RCRGSRIAPT VAFKQAPQKP

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.