CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84037	Sorghum	cytosol, extracellular, plastid	14.64	60.82
OQU80645	Sorghum	cytosol	51.86	52.12
EER94748	Sorghum	mitochondrion	56.33	51.95
EES10106	Sorghum	plastid	51.86	50.98
KXG35787	Sorghum	cytosol	49.63	50.89
EES08840	Sorghum	cytosol	51.12	50.86
EES08841	Sorghum	cytosol	51.12	49.88
KXG25325	Sorghum	plastid	52.36	48.28
EES15134	Sorghum	plastid	50.37	46.67
OQU88041	Sorghum	cytosol	44.91	43.83
OQU80643	Sorghum	cytosol	51.12	41.87
EES10271	Sorghum	cytosol	31.51	36.08
OQU83677	Sorghum	cytosol	25.56	30.93
EER90785	Sorghum	cytosol	25.31	22.72
EER95163	Sorghum	cytosol	25.81	22.61
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.08	20.51
EER93762	Sorghum	plastid	21.59	19.55
EER97967	Sorghum	nucleus	23.33	19.11
EER91181	Sorghum	plastid	21.59	18.87
OQU79585	Sorghum	cytosol	22.58	18.8
EER90215	Sorghum	plastid	20.84	17.83

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5X2F7	EnsemblPlants:EER99713	ProteinID:EER99713
ProteinID:EER99713.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	EnsemblPlantsGene:SORBI_3002G377600	SUPFAM:SSF52151
UniParc:UPI0001A83E21	RefSeq:XP_002463192.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73437257..73440299

Molecular Weight (calculated)

43769.3 Da

IEP (calculated)

5.832

GRAVY (calculated)

-0.218

Length

403 amino acids

Sequence
(BLAST)

001: MATLASRKVT VLTIDGGGIR GLIPGTILTF LEKKLQELDG PNARLADYFD YIAGTSTGGL ITAMLAAPNK DKRPLFTAEG INKFYLENGP KIFPQRPDFA
101: NTLLELKGPK YDGEFLHSKI QGLLGATRVN ETLTNVVIPA FDVKNLQPTI FSTFDYFTRT CTGAGSDPAS EERAPLGRLH LPTYLPAHFF QTKDDAGNTR
201: DFNLIDGGVA ANNPTMVTIN QITRKMIVDK QEIFPGGPTD YDKFLVISIG TGSGKGAATY TAKDAAGWGI LSWLHTKEGY TPIVDMFSYS SAALVDYNVS
301: ILFQALRSEK NYLRIQDDSL KGTEATVDVA TEENMKKLIE IGERMLATTV SRVDMETGKP VAVPEEGTNA EALTRFAKML SDERKARTSS SSPEAIKPAG
401: SAL

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.