CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042504_P002	Maize	cytosol	87.41	85.75
Os01t0898500-01	Rice	plastid	75.79	76.16
OQU84037	Sorghum	cytosol, extracellular, plastid	13.32	56.7
OQU80645	Sorghum	cytosol	46.73	48.13
KXG35787	Sorghum	cytosol	45.04	47.33
EES08840	Sorghum	cytosol	45.28	46.17
EES10106	Sorghum	plastid	45.76	46.1
KXG25325	Sorghum	plastid	48.67	46.0
EES15134	Sorghum	plastid	47.7	45.29
EES08841	Sorghum	cytosol	45.04	45.04
EER99713	Sorghum	cytosol	43.83	44.91
EER94748	Sorghum	mitochondrion	45.04	42.56
Solyc02g090660.1.1	Tomato	cytosol, peroxisome, plastid	28.33	42.39
PGSC0003DMT400040802	Potato	mitochondrion	15.25	42.0
OQU80643	Sorghum	cytosol	46.0	38.62
EES10271	Sorghum	cytosol	29.78	34.94
OQU83677	Sorghum	cytosol	22.28	27.63
EER90785	Sorghum	cytosol	24.46	22.49
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.52	21.43
EER93762	Sorghum	plastid	23.0	21.35
EER95163	Sorghum	cytosol	23.73	21.3
EER91181	Sorghum	plastid	22.28	19.96
EER97967	Sorghum	nucleus	23.73	19.92
OQU79585	Sorghum	cytosol	22.28	19.01
EER90215	Sorghum	plastid	20.1	17.62

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EntrezGene:8078679	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5XFD7	ProteinID:EES01907.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	InterPro:IPR002641	ProteinID:OQU88039.1	EnsemblPlants:OQU88041
ProteinID:OQU88041	ProteinID:OQU88041.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF11	EnsemblPlantsGene:SORBI_3003G389400	SUPFAM:SSF52151	UniParc:UPI0001A85095	RefSeq:XP_002456787.1	:

Description

hypothetical protein

Coordinates

chr3:+:70075527..70082226

Molecular Weight (calculated)

45652.3 Da

IEP (calculated)

8.050

GRAVY (calculated)

-0.130

Length

413 amino acids

Sequence
(BLAST)

001: MENNHACPPP SKGNLITILS IDGGGVKGII PGTFLAFLES KLQELDGSNA RIANYFDVIA GTSTGGLITA MLAAPSLNNA KQPCYEAKDI VPFYLKHSPR
101: IFPCRTGILG WFFKILQIIK MIIGPKYDGK YLHKMTNDLL GDTRLKETLT NVVVPTFDVK CVKPTIFSTF KARSDTLMNA RLGDVCIGTS AAPTVLPAHY
201: FETVDYHTGS SRSFNIIDGG LAANNPTLVA MGEITEQIRQ KSKEFPETKP LDYHRYLVVS LGTGLPEQDI KFDACRVAKW GIFGWFGREN TMPLLQMFLH
301: ASSDMTDSYV ADLFKAIGCS DQLLRIQDRN IPIGAVPADL STEKNLQGLV KIGENLLHKP LSKDDYKINY IETVPKDSRA LTYAGMLTQF AKLLSDERKL
401: RLQNMELDDG SKS

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.