CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10106	Sorghum	plastid	85.71	86.34
EES08840	Sorghum	cytosol	82.57	84.2
TraesCS1B01G313800.1	Wheat	cytosol	78.21	79.56
TraesCS1A01G059100.1	Wheat	cytosol	78.69	79.46
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	78.45	79.41
TraesCS1D01G302900.1	Wheat	cytosol	77.48	79.01
TraesCS1D01G060500.1	Wheat	cytosol	78.45	78.83
TraesCS7A01G177300.1	Wheat	cytosol	77.72	78.68
TraesCS1A01G303400.1	Wheat	cytosol	77.0	78.33
TraesCS7D01G178600.1	Wheat	cytosol	77.0	77.94
TraesCS7B01G082400.1	Wheat	cytosol	77.0	77.94
Os11t0614400-01	Rice	plasma membrane	78.45	77.7
HORVU1Hr1G069200.2	Barley	cytosol	76.03	77.34
HORVU1Hr1G012140.1	Barley	plastid	76.03	76.96
Os11t0614500-02	Rice	cytosol	44.55	75.1
HORVU7Hr1G036460.1	Barley	plasma membrane	77.24	69.8
OQU84037	Sorghum	cytosol, extracellular, plastid	14.29	60.82
OQU80645	Sorghum	cytosol	52.54	54.11
KXG35787	Sorghum	cytosol	51.33	53.94
KXG25325	Sorghum	plastid	54.24	51.26
EER99713	Sorghum	cytosol	49.88	51.12
EES15134	Sorghum	plastid	52.78	50.11
EER94748	Sorghum	mitochondrion	52.54	49.66
OQU88041	Sorghum	cytosol	45.04	45.04
EES10271	Sorghum	cytosol	37.05	43.47
OQU80643	Sorghum	cytosol	51.09	42.89
OQU83677	Sorghum	cytosol	24.94	30.93
EER90785	Sorghum	cytosol	23.73	21.83
EER95163	Sorghum	cytosol	24.21	21.74
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.55	20.51
EER93762	Sorghum	plastid	21.55	20.0
EER97967	Sorghum	nucleus	23.49	19.72
EER91181	Sorghum	plastid	20.58	18.44
OQU79585	Sorghum	cytosol	21.31	18.18
EER90215	Sorghum	plastid	19.61	17.2

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EntrezGene:8079099	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5Y6D9	EnsemblPlants:EES08841
ProteinID:EES08841	ProteinID:EES08841.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10	EnsemblPlantsGene:SORBI_3005G186400
SUPFAM:SSF52151	unigene:Sbi.10932	UniParc:UPI0001A864D1	RefSeq:XP_002449853.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:67107566..67109486

Molecular Weight (calculated)

44888.7 Da

IEP (calculated)

6.248

GRAVY (calculated)

-0.151

Length

413 amino acids

Sequence
(BLAST)

001: MASSGTNATG DGTVPQPPPS QGRLITVLSI DGGGIRGLIP ATIITCLETK LQELDGPDAR IADYFDVIAG TSTGALLTSM LAAPDENRRP LFAAKDLTTF
101: YLENGPNIFP QRKVGWLTPV ANLIGTMRGP KYDGVFLHDK IKSLTHDVRI ADTVTNIVVP AFDVKYLQPI IFSTYEAKTD ALKNAHLSDI CISTSAAPTY
201: FPAHYFTTEP AGPGDARPPR EYHLVDGGVA ANNPTMIAMS MLTKEVLRRN PDFNPGKPTE YRNYLVISVG TGSAKLAEKY TAPQCAKWGL IQWLYEGGFT
301: PIIDIFSHAS ADMVDIHAAV LFEALHCEKN YLRIQDDSLT GHASSVDIAT KENMEALIGI GKKLLKKPVA RVNIDTGMYE PVAGEGTNED ALARFAKMLS
401: DERRLRQANL NSY

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.