Factsheet for TraesCS1B01G077500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G059100.1	Wheat	cytosol	97.06	96.82
TraesCS1D01G060500.1	Wheat	cytosol	97.3	96.59
HORVU1Hr1G012140.1	Barley	plastid	90.69	90.69
TraesCS7B01G082400.1	Wheat	cytosol	90.2	90.2
TraesCS1B01G313800.1	Wheat	cytosol	88.24	88.67
EES08841	Sorghum	cytosol	79.41	78.45
EES08840	Sorghum	cytosol	76.96	77.53
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	76.96	77.15
Os11t0614400-01	Rice	plasma membrane	78.68	76.98
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	76.72	76.9
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	76.72	76.9
EES10106	Sorghum	plastid	77.21	76.83
Zm00001d007618_P001	Maize	mitochondrion	76.23	76.41
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	75.74	75.37
Zm00001d007623_P002	Maize	mitochondrion	76.72	74.88
Os11t0614500-02	Rice	cytosol	42.4	70.61
TraesCS3B01G036100.1	Wheat	cytosol	37.01	55.51
TraesCS4B01G286600.1	Wheat	plastid	58.09	54.73
TraesCS3B01G036800.1	Wheat	plastid	57.11	53.69
TraesCS5B01G241100.2	Wheat	cytosol	53.68	53.68
TraesCS6B01G170200.1	Wheat	plastid	55.64	53.41
TraesCS7B01G411200.1	Wheat	plastid	54.9	53.08
TraesCS7B01G411800.1	Wheat	plastid	55.64	53.04
TraesCS4B01G286000.1	Wheat	mitochondrion	54.66	52.72
TraesCS7B01G411300.1	Wheat	mitochondrion	52.94	51.55
TraesCS2B01G185200.1	Wheat	cytosol	50.49	50.61
TraesCS5B01G529000.1	Wheat	cytosol	48.04	49.37
TraesCS5B01G529100.1	Wheat	cytosol	47.3	49.23
TraesCS3B01G036500.1	Wheat	plastid	45.34	41.67
TraesCS6B01G009800.1	Wheat	cytosol	41.91	38.26
TraesCS3B01G001300.1	Wheat	cytosol	48.04	36.23
TraesCS5B01G424100.1	Wheat	cytosol	23.04	23.92
TraesCS4B01G221000.1	Wheat	cytosol	25.25	22.39
TraesCS5B01G423900.1	Wheat	cytosol	23.77	21.85
TraesCS7B01G364900.1	Wheat	cytosol	20.1	20.25
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	22.79	19.21
TraesCS5B01G379300.1	Wheat	plastid	22.79	19.18

Protein Annotations

EnsemblPlants:TraesCS1B01G077500.1	EnsemblPlantsGene:TraesCS1B01G077500	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	ncoils:Coil	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10
PFAM:PF01734	PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	TIGR:cd07214	MapMan:5.7.2.2.3

Description

No Description!

Coordinates

chr1B:-:60107697..60109124

Molecular Weight (calculated)

44572.5 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.179

Length

408 amino acids

Sequence
(BLAST)

001: MCSHGHAEPA TACPPPSQGR LITVLSIDGG GIRGLIPSTI LACLESKLQE LDGPDARIAD YFDVIAGTST GALVTSMLAA PGENKRPLFE AKEINKFYLD
101: NGPKIFPQRS WGLLTPIGNM FGAVMGPKYD GKFLHDKIKS LTNDVTVADT VTNIIVPTFD VKYLQPIIFN TYEAKVDPLK NAHLSDICIS TSAAPTYFPA
201: HYFTTRDPAG KLPDREYHLI DGGVAANNPT MAAMSMITKE VLRRNPDFTH GKPAEYGNYL IISIGTGSAK MAEKYTAPDC AKWGVLRWLY DGGFTPLIDI
301: FSHASADMVD IHAAVLFQAL RIEKNYLRIQ DDSLTGHTSS VDIATKENME ALIGIGKNLL KKNVSRVNID TGMYESVDGE GTNEEALARF ARKLSVERKL
401: RQTNLNSK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.