Factsheet for TraesCS6B01G009800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	90.16	89.75
TraesCS6A01G004800.1	Wheat	cytosol	89.26	88.86
HORVU6Hr1G001990.1	Barley	cytosol	83.45	82.89
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	38.26	41.91
TraesCS7B01G082400.1	Wheat	cytosol	38.26	41.91
TraesCS3B01G001300.1	Wheat	cytosol	50.56	41.77
TraesCS1B01G313800.1	Wheat	cytosol	37.81	41.63
TraesCS5B01G241100.2	Wheat	cytosol	31.54	34.56
TraesCS7B01G411200.1	Wheat	plastid	32.44	34.36
TraesCS4B01G286600.1	Wheat	plastid	33.11	34.18
TraesCS4B01G286000.1	Wheat	mitochondrion	32.21	34.04
TraesCS7B01G411800.1	Wheat	plastid	32.44	33.88
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	38.48	33.79
TraesCS5B01G529000.1	Wheat	cytosol	29.98	33.75
TraesCS5B01G529100.1	Wheat	cytosol	29.53	33.67
TraesCS7B01G411300.1	Wheat	mitochondrion	31.54	33.65
TraesCS6B01G170200.1	Wheat	plastid	31.99	33.65
TraesCS3B01G036100.1	Wheat	cytosol	20.36	33.46
TraesCS3B01G036800.1	Wheat	plastid	32.21	33.18
TraesCS2B01G185200.1	Wheat	cytosol	29.75	32.68
EES10271	Sorghum	cytosol	24.38	30.97
TraesCS3B01G036500.1	Wheat	plastid	26.4	26.58
TraesCS5B01G424100.1	Wheat	cytosol	20.13	22.9
TraesCS5B01G423900.1	Wheat	cytosol	21.25	21.4
TraesCS4B01G221000.1	Wheat	cytosol	21.48	20.87
TraesCS7B01G364900.1	Wheat	cytosol	18.34	20.25
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	19.24	17.77
TraesCS5B01G379300.1	Wheat	plastid	18.57	17.11

Protein Annotations

EnsemblPlants:TraesCS6B01G009800.1	EnsemblPlantsGene:TraesCS6B01G009800	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	ncoils:Coil	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10
PFAM:PF01734	PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.3	:

Description

No Description!

Coordinates

chr6B:+:6028842..6030477

Molecular Weight (calculated)

50281.2 Da

IEP (calculated)

5.496

GRAVY (calculated)

-0.387

Length

447 amino acids

Sequence
(BLAST)

001: MSSNKDELET PLLMPEEEEG PTARLLDQGS ADPTPRPRLP PPKFGEVITV LSINSGGMHG LIPTVVLKCL EEKLQAIDRE DARIADYFDV IAGMSAGSMI
101: ATMLVSPNTN KRTKYTPQEI QDFYVKNGPN IFPSKRWWRR PLDLLIASRG PKYDRTFLQK NKIKEVTSER TLSKLVAPMF DANILEPLIF SSFQDAVQEL
201: VEEAGPDMPN VCIGPPATAM PTYFPAHYFD IWVSDMEPAK YHLIDGGNNP TMAAISKITR EQLLKNPEFH PSGMDYMKYL VISVGAWCAV HENVPAKQGA
301: FNWFHSRRNS HSPVTDTSSH ASAVLADWQV RMLLHNGNRV RKQNYLYIQA LAPLFGEAIL PMDNATSKNM ADLLDIGYKL LAEKVAMVDL TTGKYETVED
401: ENAPTNDAEL QRFSELLVAE RNLRLKEQQR QRQGEEQNGV HLLNIIE

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.