Factsheet for TraesCS5B01G379300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385900.1	Wheat	cytosol	90.31	98.87
TraesCSU01G072800.1	Wheat	cytosol	89.69	98.86
HORVU5Hr1G093250.4	Barley	cytosol	89.9	96.89
Zm00001d033254_P001	Maize	cytosol	70.93	80.19
Os03t0640000-00	Rice	cytosol	72.16	79.37
EER91181	Sorghum	plastid	72.58	76.36
Zm00001d000203_P001	Maize	cytosol	69.69	75.96
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.84	75.81
EER93762	Sorghum	plastid	69.48	75.73
Zm00001d033256_P001	Maize	cytosol	68.87	75.39
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	64.74	64.88
TraesCS5B01G424100.1	Wheat	cytosol	43.51	53.69
GSMUA_Achr8P07160_001	Banana	cytosol	40.41	51.85
TraesCS5B01G423900.1	Wheat	cytosol	46.6	50.9
GSMUA_Achr11P...	Banana	cytosol	28.25	48.93
GSMUA_Achr2P01360_001	Banana	cytosol	39.79	48.37
GSMUA_Achr5P26630_001	Banana	cytosol	34.23	48.12
TraesCS7B01G364900.1	Wheat	cytosol	38.97	46.67
VIT_10s0092g00150.t01	Wine grape	cytosol	40.82	46.37
KRH36757	Soybean	cytosol	40.62	45.39
KRH11757	Soybean	cytosol	40.41	45.37
PGSC0003DMT400021555	Potato	cytosol	39.79	44.37
PGSC0003DMT400060932	Potato	cytosol	39.18	44.29
Solyc10g080690.1.1	Tomato	cytosol	39.38	44.21
Solyc10g078530.1.1	Tomato	cytosol	39.18	43.68
TraesCS4B01G221000.1	Wheat	cytosol	39.38	41.52
TraesCS5B01G241100.2	Wheat	cytosol	20.0	23.77
TraesCS4B01G286000.1	Wheat	mitochondrion	20.41	23.4
TraesCS5B01G529100.1	Wheat	cytosol	18.56	22.96
TraesCS7B01G082400.1	Wheat	cytosol	19.18	22.79
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	19.18	22.79
TraesCS1B01G313800.1	Wheat	cytosol	18.97	22.66
TraesCS6B01G170200.1	Wheat	plastid	19.38	22.12
TraesCS7B01G411800.1	Wheat	plastid	19.38	21.96
TraesCS4B01G286600.1	Wheat	plastid	19.59	21.94
TraesCS5B01G529000.1	Wheat	cytosol	17.94	21.91
TraesCS2B01G185200.1	Wheat	cytosol	18.35	21.87
TraesCS7B01G411200.1	Wheat	plastid	18.56	21.33
TraesCS7B01G411300.1	Wheat	mitochondrion	18.14	21.0
TraesCS3B01G036800.1	Wheat	plastid	18.76	20.97
TraesCS6B01G009800.1	Wheat	cytosol	17.11	18.57
TraesCS3B01G036100.1	Wheat	cytosol	10.31	18.38
TraesCS3B01G001300.1	Wheat	cytosol	19.59	17.56
TraesCS3B01G036500.1	Wheat	plastid	14.64	15.99

Protein Annotations

EnsemblPlants:TraesCS5B01G379300.1	EnsemblPlantsGene:TraesCS5B01G379300	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFAM:PF01734
PFscan:PS51635	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52151	MapMan:5.7.2.2.4	:

Description

No Description!

Coordinates

chr5B:+:557354381..557355838

Molecular Weight (calculated)

49999.2 Da

IEP (calculated)

8.581

GRAVY (calculated)

0.055

Length

485 amino acids

Sequence
(BLAST)

001: MTSTWTLDTI AVSALSASIV TTVSSCTGRA HGTTCQVVRR STMEAMASPV PMDVDKLSYE IFALLESKFL FGAGGAGCLS GPGTPFRGAN DGRVRVLAVD
101: GCGAGAGDAL LAAAALARLE AGLRQRAGDP DARVADFFDV AAGAGAGGVL AAMLFLKGAD GRPRYTAEEA LAFVAGSVGK DWGGRRRGWT KLFRGGARKA
201: ERSFRRVFGD ATLRDTVAPV LVPCYDLATG APFMFSRADA VESDSFDFRL TDVCAATCAA AGAAAAVRSV DGRTAIAAAS GAVAAMGNPA SAAITHVLHN
301: KQEFPLAVSM DDILVLSIGT GASSSAATCG NGWSTPIPAR SPSRDELARV TAQGVADMVD EAVAMAFGHA SDSNYVRLQA SNALNSPHTQ TAGAAAGAML
401: SQRNVESVLF RGRRLSDRTN AEKVDALAAE LVKEQERRMR SPLPNVVIKQ VASPRLSSAT TASSVTATVR TASTMPSPAS WDSRQ

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.