Factsheet for TraesCS5B01G052000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	98.55	99.38
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	98.14	98.34
HORVU5Hr1G011400.6	Barley	mitochondrion	84.3	91.07
Zm00001d041481_P001	Maize	cytosol	77.27	82.38
OQU79585	Sorghum	cytosol	80.58	80.58
TraesCS5B01G379300.1	Wheat	plastid	64.88	64.74
Zm00001d031053_P001	Maize	plastid	71.9	62.25
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	64.46	59.77
TraesCS5B01G424100.1	Wheat	cytosol	45.66	56.23
TraesCS5B01G423900.1	Wheat	cytosol	50.0	54.5
GSMUA_Achr8P07160_001	Banana	cytosol	41.12	52.65
GSMUA_Achr11P...	Banana	cytosol	30.17	52.14
GSMUA_Achr2P01360_001	Banana	cytosol	40.5	49.12
GSMUA_Achr5P26630_001	Banana	cytosol	34.71	48.7
TraesCS7B01G364900.1	Wheat	cytosol	39.88	47.65
KRH36757	Soybean	cytosol	42.36	47.23
KRH11757	Soybean	cytosol	42.15	47.22
VIT_10s0092g00150.t01	Wine grape	cytosol	40.91	46.37
PGSC0003DMT400021555	Potato	cytosol	41.53	46.21
Solyc10g078530.1.1	Tomato	cytosol	41.12	45.75
PGSC0003DMT400060932	Potato	cytosol	40.08	45.22
Solyc10g080690.1.1	Tomato	cytosol	39.88	44.68
TraesCS4B01G221000.1	Wheat	cytosol	39.67	41.74
TraesCS5B01G241100.2	Wheat	cytosol	21.49	25.49
TraesCS4B01G286000.1	Wheat	mitochondrion	21.28	24.35
TraesCS2B01G185200.1	Wheat	cytosol	20.04	23.83
TraesCS5B01G529100.1	Wheat	cytosol	19.21	23.72
TraesCS5B01G529000.1	Wheat	cytosol	19.42	23.68
TraesCS6B01G170200.1	Wheat	plastid	20.45	23.29
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	19.21	22.79
TraesCS7B01G411200.1	Wheat	plastid	19.83	22.75
TraesCS4B01G286600.1	Wheat	plastid	20.25	22.63
TraesCS7B01G082400.1	Wheat	cytosol	19.01	22.55
TraesCS7B01G411300.1	Wheat	mitochondrion	19.42	22.43
TraesCS7B01G411800.1	Wheat	plastid	19.83	22.43
TraesCS1B01G313800.1	Wheat	cytosol	18.8	22.41
TraesCS3B01G036800.1	Wheat	plastid	19.01	21.2
TraesCS3B01G036100.1	Wheat	cytosol	11.16	19.85
TraesCS6B01G009800.1	Wheat	cytosol	17.77	19.24
TraesCS3B01G001300.1	Wheat	cytosol	20.87	18.67
TraesCS3B01G036500.1	Wheat	plastid	14.88	16.22

Protein Annotations

EnsemblPlants:TraesCS5B01G052000.1	EnsemblPlantsGene:TraesCS5B01G052000	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.4	:	:	:

Description

No Description!

Coordinates

chr5B:+:56979245..56980789

Molecular Weight (calculated)

48987.0 Da

IEP (calculated)

9.698

GRAVY (calculated)

-0.034

Length

484 amino acids

Sequence
(BLAST)

001: MASPPPQVDV DLGKLSYEIF SFLESKFLYG GGGGAGGGGV CSLPGTPGRG PLGGGGARVR VLAIDGCGPG PGDALLAAAA LARLEAALRA KAGDPDARVA
101: DFFDAAAGAG AGGVLAAMLF VRGVDGRPKY TAADALAFVA ASLGKGGWGG GGGGWRGRWA ALFRRGERSS DKSSLSASSS SSSLRRVFGD ATLRDTVAPL
201: LVPCYDLATG APFLFSRADA VESDSFDFRL RDVCAATCAG GSAAAAVRSI DGRTAIAAAS GGVAAMGNPA AAAITHVLHN KQEFPLAAGV DDLLVVSIGS
301: GSSSGGTASG SATPSAGWRT PIPPRSPSPA EMVRLTAEGV ADMVDQAVAM AFGHTCGRNY VRIQAAAPAH SIKALRSLEA RKVVAIADGM LTQRNVEAEL
401: FRGRRLSEKS NREKLDAFAT ELVKEHDRRR DSPPGLLPNV AIKQVSPTPP RLSSATTSSA ATTGTTGRTA STMPSPASTQ DSRH

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.