Factsheet for HORVU5Hr1G011400.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	90.4	84.38
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	91.07	84.3
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	90.62	84.06
Zm00001d041481_P001	Maize	cytosol	72.77	71.81
OQU79585	Sorghum	cytosol	75.0	69.42
HORVU5Hr1G093250.4	Barley	cytosol	61.38	61.11
Zm00001d031053_P001	Maize	plastid	66.07	52.95
GSMUA_Achr8P07160_001	Banana	cytosol	43.08	51.06
GSMUA_Achr11P...	Banana	cytosol	31.25	50.0
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	57.14	49.04
GSMUA_Achr2P01360_001	Banana	cytosol	42.63	47.87
GSMUA_Achr5P26630_001	Banana	cytosol	36.38	47.25
HORVU5Hr1G103060.1	Barley	mitochondrion	46.43	43.79
KRH11757	Soybean	cytosol	41.29	42.82
HORVU7Hr1G106600.4	Barley	cytosol	24.55	42.8
KRH36757	Soybean	cytosol	41.29	42.63
PGSC0003DMT400021555	Potato	cytosol	40.62	41.84
Solyc10g078530.1.1	Tomato	cytosol	40.4	41.61
VIT_10s0092g00150.t01	Wine grape	cytosol	39.51	41.45
PGSC0003DMT400060932	Potato	cytosol	39.06	40.79
Solyc10g080690.1.1	Tomato	cytosol	38.84	40.28
HORVU0Hr1G008670.3	Barley	cytosol	28.35	31.44
HORVU5Hr1G069130.5	Barley	cytosol	20.98	23.21
HORVU4Hr1G074970.1	Barley	mitochondrion	20.76	22.04
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	9.82	21.89
HORVU5Hr1G119810.5	Barley	cytosol	18.53	21.5
HORVU2Hr1G060260.1	Barley	plastid	12.95	21.09
HORVU7Hr1G113030.2	Barley	plastid	12.28	21.07
HORVU1Hr1G012140.1	Barley	plastid	18.75	20.59
HORVU4Hr1G050060.10	Barley	plastid	11.83	20.54
HORVU5Hr1G119820.1	Barley	plastid	18.08	20.4
HORVU2Hr1G029000.2	Barley	cytosol	18.75	20.39
HORVU1Hr1G069200.2	Barley	cytosol	18.08	19.95
HORVU2Hr1G037280.1	Barley	cytosol	11.16	19.38
HORVU4Hr1G075070.7	Barley	plastid	18.53	19.08
HORVU6Hr1G027900.2	Barley	cytosol	14.51	18.95
HORVU7Hr1G113080.1	Barley	cytosol	18.97	18.2
HORVU7Hr1G036460.1	Barley	plasma membrane	18.08	17.72
HORVU4Hr1G019140.24	Barley	cytosol	8.48	17.51
HORVU3Hr1G004220.4	Barley	cytosol, plastid	17.86	16.67
HORVU6Hr1G001990.1	Barley	cytosol	16.52	16.44
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	17.86	14.21
HORVU7Hr1G006840.3	Barley	cytosol	9.15	14.14
HORVU2Hr1G126570.1	Barley	extracellular	8.26	10.36

Protein Annotations

EnsemblPlants:HORVU5Hr1G011400.6	EnsemblPlantsGene:HORVU5Hr1G011400	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B472F2B	UniProt:A0A287QCK1	MapMan:5.7.2.2.4	:

Description

No Description!

Coordinates

chrchr5H:-:29829867..29831530

Molecular Weight (calculated)

45347.7 Da

IEP (calculated)

10.053

GRAVY (calculated)

-0.045

Length

448 amino acids

Sequence
(BLAST)

001: DARTRRMWIA CQPASGPRVS QLPPRGRGNT PSAVALRVLI FSFLESKFLY GAGAGGGVCS LPGTPGRGPV GGGGARVRVL AIDGCGPGPG DALLAAAALA
101: RLEAALRAKA GDPDARVADF FDAAAGAGAG GVLXXSDKSS SLSASSSSSS LRRVFGDATL RDTVAPLLVP CYDLATGAPF LFSRADAVES DSFDFRLRDV
201: CAATCAGGSA AAAVRSVDGR TAIAAASGGV AAMGNPAAAA ITHVLHNKQE FPLAAGVDDL LVVSIGSGSS SGGTASGSAT PSAGWRTPIP PRSPSPAEMV
301: RLTAEGVADM VDQAVAMAFG HTCGRNYVRI QPAHSIKALR SLEAKKVVAI ADGMLTQRNV EAELFRGRRL SEKSNREKLD AFATELVKEH DRRRDSPPGL
401: LPNVAIKQVS PTPPRLSSAT TSSAATTGTT GRTASTIPSP ASTQDSRH

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.