Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G012900.1 | Wheat | cytosol | 92.01 | 94.35 |
| HORVU2Hr1G126570.1 | Barley | extracellular | 50.62 | 79.83 |
| OQU84037 | Sorghum | cytosol, extracellular, plastid | 9.41 | 54.64 |
| HORVU1Hr1G012140.1 | Barley | plastid | 30.55 | 42.16 |
| HORVU5Hr1G069130.5 | Barley | cytosol | 30.2 | 41.98 |
| HORVU1Hr1G069200.2 | Barley | cytosol | 30.02 | 41.63 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 18.83 | 41.09 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 28.06 | 40.93 |
| HORVU5Hr1G119820.1 | Barley | plastid | 28.6 | 40.55 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 29.48 | 40.29 |
| HORVU4Hr1G074970.1 | Barley | mitochondrion | 29.84 | 39.81 |
| HORVU7Hr1G113030.2 | Barley | plastid | 18.12 | 39.08 |
| HORVU4Hr1G019140.24 | Barley | cytosol | 14.56 | 37.79 |
| HORVU4Hr1G075070.7 | Barley | plastid | 29.13 | 37.7 |
| HORVU7Hr1G036460.1 | Barley | plasma membrane | 30.37 | 37.42 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 18.65 | 36.21 |
| Zm00001d042041_P001 | Maize | cytosol | 24.33 | 36.15 |
| HORVU3Hr1G101170.1 | Barley | mitochondrion, plastid | 12.43 | 34.83 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 29.13 | 34.17 |
| HORVU4Hr1G050060.10 | Barley | plastid | 15.63 | 34.11 |
| HORVU2Hr1G060260.1 | Barley | plastid | 16.34 | 33.45 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 27.35 | 32.98 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 19.01 | 31.2 |
| HORVU6Hr1G001990.1 | Barley | cytosol | 22.56 | 28.22 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 14.39 | 20.05 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 16.87 | 20.0 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 15.81 | 19.78 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 14.21 | 17.86 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 7.99 | 17.51 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G126660.1 | EnsemblPlantsGene:HORVU2Hr1G126660 | Gene3D:3.40.1090.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:Acyl_Trfase/lysoPLipase |
| InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF10 | PFAM:PF01734 | PFscan:PS51635 |
| SEG:seg | SUPFAM:SSF52151 | UniParc:UPI000B47720B | UniProt:A0A287JU36 | MapMan:35.1 | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287JU36]
Coordinates
chrchr2H:-:764066166..764068256
Molecular Weight (calculated)
62429.1 Da
IEP (calculated)
4.934
GRAVY (calculated)
-0.183
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: TLAAATHKVE RSIQMAPAAA ATKQDGELRI LCIDGGGIRG LIPAKILEYL EAELQRIEGS STARLADYFD YIVGTSTGAL VTTMLAAPDK DNRPLCTAKE
101: IIDLYLEEGA GIFTNEHKAT WAQVVLEAVL LYIKYYDGDN KTLRSLHDML AVGLAIEPLL RPILDALIHA NGGGLQQLAA APHDPDDAAS NGDEAPPANM
201: EDCIQEHAGA ILQAMCRAQG LALDSTPFDE CIKEFVEGLR MTLLNPDFVR YALLRPKYDG EGLRKVVRGK LGDRKLKETV TNVIVPTFDI KRNQPVVFST
301: SKAQQDRVMN PNLSDICIAA TAAPTFFPAH KFYIINLCPL NFELEEFNLI DAGMFANNPT TVAMNEVWRM IDRGEHLPVE GLSPMDCSKL RILSVGTGVV
401: NHSYTADECN WWGVLPWMYN VRNKTQPLVD TLMYATGSLV DYNVALLFKS QGYEDHYLRI QEDHLDPSLG AMDDTSSMEK LIETGENLLD RQVYRTDCET
501: REYRPVKGAG TNKEALTKLA EQLVAERRRR EATAPPMLLM SVTEIATVVE PRPKRLKPTY VVQ
101: IIDLYLEEGA GIFTNEHKAT WAQVVLEAVL LYIKYYDGDN KTLRSLHDML AVGLAIEPLL RPILDALIHA NGGGLQQLAA APHDPDDAAS NGDEAPPANM
201: EDCIQEHAGA ILQAMCRAQG LALDSTPFDE CIKEFVEGLR MTLLNPDFVR YALLRPKYDG EGLRKVVRGK LGDRKLKETV TNVIVPTFDI KRNQPVVFST
301: SKAQQDRVMN PNLSDICIAA TAAPTFFPAH KFYIINLCPL NFELEEFNLI DAGMFANNPT TVAMNEVWRM IDRGEHLPVE GLSPMDCSKL RILSVGTGVV
401: NHSYTADECN WWGVLPWMYN VRNKTQPLVD TLMYATGSLV DYNVALLFKS QGYEDHYLRI QEDHLDPSLG AMDDTSSMEK LIETGENLLD RQVYRTDCET
501: REYRPVKGAG TNKEALTKLA EQLVAERRRR EATAPPMLLM SVTEIATVVE PRPKRLKPTY VVQ
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.