Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G464400.1 | Wheat | cytosol | 85.6 | 53.79 |
TraesCS7B01G364900.1 | Wheat | cytosol | 84.44 | 53.58 |
TraesCS7D01G452000.1 | Wheat | cytosol | 85.21 | 52.27 |
Zm00001d014386_P001 | Maize | cytosol, plastid | 76.65 | 48.28 |
EER90215 | Sorghum | plastid | 76.26 | 41.61 |
Os06t0677000-00 | Rice | plastid | 77.82 | 41.58 |
VIT_10s0092g00150.t01 | Wine grape | cytosol | 42.8 | 25.76 |
KRH36757 | Soybean | cytosol | 42.8 | 25.35 |
Solyc10g080690.1.1 | Tomato | cytosol | 42.41 | 25.23 |
KRH11757 | Soybean | cytosol | 42.41 | 25.23 |
PGSC0003DMT400021555 | Potato | cytosol | 42.02 | 24.83 |
PGSC0003DMT400060932 | Potato | cytosol | 41.25 | 24.71 |
HORVU5Hr1G011400.6 | Barley | mitochondrion | 42.8 | 24.55 |
Solyc10g078530.1.1 | Tomato | cytosol | 41.25 | 24.37 |
HORVU5Hr1G093250.4 | Barley | cytosol | 42.41 | 24.22 |
HORVU5Hr1G103060.1 | Barley | mitochondrion | 38.91 | 21.05 |
HORVU3Hr1G101170.1 | Barley | mitochondrion, plastid | 13.62 | 17.41 |
HORVU4Hr1G050060.10 | Barley | plastid | 16.34 | 16.28 |
HORVU0Hr1G008670.3 | Barley | cytosol | 25.29 | 16.09 |
HORVU2Hr1G060260.1 | Barley | plastid | 17.12 | 16.0 |
HORVU6Hr1G027900.2 | Barley | cytosol | 18.29 | 13.7 |
HORVU5Hr1G069130.5 | Barley | cytosol | 18.68 | 11.85 |
HORVU4Hr1G075070.7 | Barley | plastid | 18.29 | 10.8 |
HORVU4Hr1G074970.1 | Barley | mitochondrion | 17.51 | 10.66 |
HORVU5Hr1G119810.5 | Barley | cytosol | 15.56 | 10.36 |
HORVU7Hr1G006840.3 | Barley | cytosol | 11.67 | 10.34 |
HORVU2Hr1G029000.2 | Barley | cytosol | 15.95 | 9.95 |
HORVU7Hr1G113080.1 | Barley | cytosol | 17.12 | 9.42 |
HORVU1Hr1G069200.2 | Barley | cytosol | 14.79 | 9.36 |
HORVU1Hr1G012140.1 | Barley | plastid | 14.79 | 9.31 |
HORVU5Hr1G119820.1 | Barley | plastid | 13.62 | 8.82 |
HORVU7Hr1G036460.1 | Barley | plasma membrane | 15.56 | 8.75 |
HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 15.95 | 8.54 |
HORVU6Hr1G001990.1 | Barley | cytosol | 14.79 | 8.44 |
HORVU2Hr1G126660.1 | Barley | cytosol, nucleus | 17.51 | 7.99 |
HORVU2Hr1G126570.1 | Barley | extracellular | 10.12 | 7.28 |
HORVU7Hr1G113030.2 | Barley | plastid | 5.84 | 5.75 |
HORVU2Hr1G037280.1 | Barley | cytosol | 5.45 | 5.43 |
HORVU4Hr1G019140.24 | Barley | cytosol | 2.33 | 2.76 |
Protein Annotations
EnsemblPlants:HORVU7Hr1G106600.4 | EnsemblPlantsGene:HORVU7Hr1G106600 | Gene3D:3.40.1090.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | PANTHER:PTHR32241 |
PANTHER:PTHR32241:SF7 | SEG:seg | UniParc:UPI000B47DEF5 | UniProt:A0A287XPD8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr7H:+:620235861..620269251
Molecular Weight (calculated)
26341.1 Da
IEP (calculated)
7.342
GRAVY (calculated)
0.005
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: FSRADAVEAE AFDFPLWQVC AAACGVGPAE VASLDGRTTL RAAAAAGGTG AGVANPTAVA VTHVLHNKRE FPFAAGAGDL VVLSLGGNAA AGTGARASSS
101: SLLRIAGACQ ADMVDQAVAM AFGESRATNY VRIQVNKSYC TLLLGYCCHC ENADGADPSL RRVVTPQGNG ITAGATAEAA MAERGVESVL FRGKKLMPQT
201: NGERLDGVAE QLVREQHRRM DSKTPVVLIK PSATPRTSSS SASTLITVST NSSSESP
101: SLLRIAGACQ ADMVDQAVAM AFGESRATNY VRIQVNKSYC TLLLGYCCHC ENADGADPSL RRVVTPQGNG ITAGATAEAA MAERGVESVL FRGKKLMPQT
201: NGERLDGVAE QLVREQHRRM DSKTPVVLIK PSATPRTSSS SASTLITVST NSSSESP
001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
Arabidopsis Description
PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.