Factsheet for HORVU7Hr1G006840.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g079220.1.1	Tomato	cytosol	15.52	60.0
TraesCS7D01G034300.1	Wheat	mitochondrion	75.17	52.78
TraesCS4A01G449600.1	Wheat	mitochondrion	75.86	51.89
TraesCS7A01G038300.1	Wheat	mitochondrion	75.52	51.65
TraesCS4A01G450400.1	Wheat	mitochondrion	75.17	51.42
HORVU7Hr1G113030.2	Barley	plastid	44.48	49.43
Os08t0376500-00	Rice	plastid	43.45	48.46
VIT_00s0567g00050.t01	Wine grape	cytosol	35.17	47.89
Os08t0476900-01	Rice	plastid	65.52	44.19
HORVU4Hr1G075070.7	Barley	plastid	65.52	43.68
Zm00001d031811_P001	Maize	plastid	65.52	43.58
KRH61261	Soybean	cytosol, peroxisome, plastid	33.45	43.11
KXG25325	Sorghum	plastid	64.48	42.79
EES15134	Sorghum	plastid	63.1	42.07
Zm00001d031813_P001	Maize	extracellular	62.76	41.84
HORVU7Hr1G113080.1	Barley	cytosol	66.55	41.33
Os08t0477100-01	Rice	plastid	61.03	41.07
HORVU6Hr1G027900.2	Barley	cytosol	47.93	40.52
HORVU3Hr1G004220.4	Barley	cytosol, plastid	66.55	40.21
VIT_00s0567g00060.t01	Wine grape	cytosol	48.62	37.7
HORVU2Hr1G037280.1	Barley	cytosol	32.07	36.05
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	24.83	35.82
HORVU5Hr1G069130.5	Barley	cytosol	48.28	34.57
PGSC0003DMT400025955	Potato	extracellular	47.93	33.74
PGSC0003DMT400002016	Potato	cytosol	29.66	33.33
Solyc02g090490.2.1	Tomato	extracellular	47.24	33.25
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	46.55	32.85
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	44.48	31.46
PGSC0003DMT400002019	Potato	golgi, vacuole	45.52	31.43
HORVU1Hr1G069200.2	Barley	cytosol	43.79	31.28
HORVU4Hr1G050060.10	Barley	plastid	27.59	31.01
HORVU4Hr1G019140.24	Barley	cytosol	23.1	30.88
HORVU2Hr1G029000.2	Barley	cytosol	43.79	30.83
Solyc02g065090.2.1	Tomato	nucleus	44.48	30.71
HORVU1Hr1G012140.1	Barley	plastid	43.1	30.64
HORVU4Hr1G074970.1	Barley	mitochondrion	43.45	29.86
HORVU5Hr1G119810.5	Barley	cytosol	39.31	29.53
HORVU2Hr1G060260.1	Barley	plastid	27.93	29.45
HORVU5Hr1G119820.1	Barley	plastid	39.66	28.97
HORVU7Hr1G036460.1	Barley	plasma membrane	44.83	28.45
Os08t0376550-00	Rice	cytosol	17.59	28.18
VIT_00s0567g00040.t01	Wine grape	cytosol	12.07	21.6
HORVU2Hr1G126570.1	Barley	extracellular	25.86	21.01
PGSC0003DMT400058995	Potato	cytosol	11.38	20.62
HORVU6Hr1G001990.1	Barley	cytosol	31.03	20.0
Solyc04g079210.2.1	Tomato	cytosol	11.03	19.75
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	36.21	18.65
HORVU0Hr1G008670.3	Barley	cytosol	19.31	13.86
HORVU5Hr1G103060.1	Barley	mitochondrion	21.38	13.05
HORVU5Hr1G093250.4	Barley	cytosol	18.97	12.22
HORVU7Hr1G106600.4	Barley	cytosol	10.34	11.67
HORVU5Hr1G011400.6	Barley	mitochondrion	14.14	9.15

Protein Annotations

EnsemblPlants:HORVU7Hr1G006840.3	EnsemblPlantsGene:HORVU7Hr1G006840	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF15	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B48070E	UniProt:A0A287VFB5	MapMan:35.1	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287VFB5]

Coordinates

chrchr7H:+:9247252..9250448

Molecular Weight (calculated)

30948.5 Da

IEP (calculated)

8.985

GRAVY (calculated)

-0.094

Length

290 amino acids

Sequence
(BLAST)

001: MAGTSTGGFV TAMLTTPNAD GRPLFAAKDI NDFYMEHCPR IFPPVSKGPF GLLKSMTGPK YDGEHLRLVV KELLGDTRVD QTLSNIVIPT FDIKLLQPTI
101: FSTYDAMKDV SKNALLSDVC IGTSAAPTYL PGHHFETKDE YGKPRAFNLI DGGVASNNPX XXXMTDVSKQ ILMGNPDFFP IKLADYGKFM ILSLGTGAAK
201: IEEKFDVVQC SKWGTSLGGS TTGVQLRSSI ASARLAPTSL TFTPPCFSKR YIARSTTFGS MMMGSMVKQP LSTCPHRKTS TDSLTLASRC

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.