Factsheet for HORVU4Hr1G075070.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G285300.1	Wheat	plastid	97.7	98.15
TraesCS4B01G286600.1	Wheat	plastid	96.32	96.77
TraesCS4A01G017400.1	Wheat	plastid	96.32	96.77
KXG25325	Sorghum	plastid	78.39	78.03
Os08t0476900-01	Rice	plastid	76.09	76.98
Zm00001d031811_P001	Maize	plastid	77.01	76.83
EES15134	Sorghum	plastid	74.94	74.94
Os08t0477100-01	Rice	plastid	73.79	74.48
Zm00001d031813_P001	Maize	extracellular	73.79	73.79
Os08t0376500-00	Rice	plastid	43.68	73.08
HORVU7Hr1G113030.2	Barley	plastid	43.45	72.41
HORVU6Hr1G027900.2	Barley	cytosol	55.4	70.26
HORVU3Hr1G004220.4	Barley	cytosol, plastid	77.47	70.21
Os08t0376550-00	Rice	cytosol	29.2	70.17
HORVU7Hr1G113080.1	Barley	cytosol	71.26	66.38
HORVU7Hr1G006840.3	Barley	cytosol	43.68	65.52
VIT_00s0567g00050.t01	Wine grape	cytosol	31.49	64.32
KRH61261	Soybean	cytosol, peroxisome, plastid	32.64	63.11
VIT_00s0567g00060.t01	Wine grape	cytosol	54.02	62.83
HORVU1Hr1G069200.2	Barley	cytosol	52.64	56.4
HORVU5Hr1G069130.5	Barley	cytosol	52.18	56.05
Solyc04g079220.1.1	Tomato	cytosol	9.66	56.0
HORVU1Hr1G012140.1	Barley	plastid	52.41	55.88
PGSC0003DMT400025955	Potato	extracellular	52.18	55.1
Solyc02g090490.2.1	Tomato	extracellular	51.95	54.85
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.8	53.9
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	50.11	53.04
PGSC0003DMT400002016	Potato	cytosol	31.26	52.71
HORVU4Hr1G074970.1	Barley	mitochondrion	51.03	52.61
PGSC0003DMT400002019	Potato	golgi, vacuole	50.57	52.38
HORVU2Hr1G037280.1	Barley	cytosol	31.03	52.33
Solyc02g065090.2.1	Tomato	nucleus	50.11	51.9
HORVU5Hr1G119810.5	Barley	cytosol	45.98	51.81
HORVU2Hr1G029000.2	Barley	cytosol	48.97	51.7
PGSC0003DMT400058995	Potato	cytosol	18.85	51.25
Solyc04g079210.2.1	Tomato	cytosol	19.08	51.23
HORVU7Hr1G036460.1	Barley	plasma membrane	53.56	50.98
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	23.45	50.75
VIT_00s0567g00040.t01	Wine grape	cytosol	18.85	50.62
HORVU5Hr1G119820.1	Barley	plastid	45.75	50.13
HORVU4Hr1G050060.10	Barley	plastid	29.66	50.0
HORVU2Hr1G060260.1	Barley	plastid	31.03	49.09
HORVU4Hr1G019140.24	Barley	cytosol	22.53	45.16
HORVU6Hr1G001990.1	Barley	cytosol	34.48	33.33
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	37.7	29.13
HORVU0Hr1G008670.3	Barley	cytosol	20.69	22.28
HORVU5Hr1G093250.4	Barley	cytosol	21.61	20.89
HORVU5Hr1G103060.1	Barley	mitochondrion	22.76	20.84
HORVU2Hr1G126570.1	Barley	extracellular	16.55	20.17
HORVU5Hr1G011400.6	Barley	mitochondrion	19.08	18.53
HORVU7Hr1G106600.4	Barley	cytosol	10.8	18.29

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:AK371618	InterPro:Acyl_Trfase/lysoPLipase	UniProt:F2E644	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	EnsemblPlantsGene:HORVU4Hr1G075070	EnsemblPlants:HORVU4Hr1G075070.7	InterPro:IPR002641	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF14	SUPFAM:SSF52151	UniParc:UPI0002007F7F	SEG:seg

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:F2E644]

Coordinates

chrchr4H:-:596446154..596448382

Molecular Weight (calculated)

46841.2 Da

IEP (calculated)

7.887

GRAVY (calculated)

-0.141

Length

435 amino acids

Sequence
(BLAST)

001: MSPVHVPELS SGGSGSGSGS LTLNPVQRAL TRLSSSSALT PRSPPPSYGS IVTVLSIDGG GVRGIIPGTI LAFLEEKLQE LDGPDVRIAD YFDVIAGTST
101: GGLVTAMLTA PDAKGRPLFA AKDINNFYLE HCPKIFPAVY GGPLGLLRSV RGPKYDGQYL HSVVKQLLGE TRIGEALQNI VIPTFDIKLL QPTIFSRYDA
201: RNDVSKNALL SDVCISTSAA PTYLPGHHFE TKHKDGKPRA FNLIDGGVAA NNPTMLAMTD VSKQILLGNQ DFFPIKPADY GKFMVLSLGT GSAKVEEKFD
301: AAACSKWGIL GWLYNKGATP LIDSFSQASA DLVDIQASVL FQALRCEKRY LRIQDDELKG DTSSVDVSTP ENLNRLVDVG KALLKRSVCR VDVETGKTVP
401: DDNRGTNEEE LISFARMLSQ ERKARLQKKG VGVTQ

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.