Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G033500.1 | Wheat | plastid | 86.04 | 95.38 |
TraesCS3D01G033200.1 | Wheat | plastid | 86.04 | 95.38 |
TraesCS3A01G046500.1 | Wheat | plastid | 85.83 | 95.15 |
TraesCS3B01G036800.1 | Wheat | plastid | 84.38 | 93.32 |
TraesCS3B01G036100.1 | Wheat | cytosol | 52.5 | 92.65 |
TraesCS3D01G033600.1 | Wheat | mitochondrion, peroxisome | 53.75 | 85.43 |
HORVU4Hr1G075070.7 | Barley | plastid | 70.21 | 77.47 |
Os08t0476900-01 | Rice | plastid | 69.17 | 77.21 |
Zm00001d031811_P001 | Maize | plastid | 68.75 | 75.69 |
KXG25325 | Sorghum | plastid | 68.12 | 74.83 |
Os08t0477100-01 | Rice | plastid | 66.04 | 73.55 |
TraesCS3B01G036500.1 | Wheat | plastid | 67.5 | 72.97 |
EES15134 | Sorghum | plastid | 65.21 | 71.95 |
Zm00001d031813_P001 | Maize | extracellular | 64.79 | 71.49 |
HORVU7Hr1G113030.2 | Barley | plastid | 38.54 | 70.88 |
HORVU7Hr1G113080.1 | Barley | cytosol | 66.67 | 68.52 |
Os08t0376500-00 | Rice | plastid | 36.46 | 67.31 |
Os08t0376550-00 | Rice | cytosol | 25.21 | 66.85 |
HORVU7Hr1G006840.3 | Barley | cytosol | 40.21 | 66.55 |
HORVU6Hr1G027900.2 | Barley | cytosol | 46.25 | 64.72 |
VIT_00s0567g00060.t01 | Wine grape | cytosol | 49.38 | 63.37 |
VIT_00s0567g00050.t01 | Wine grape | cytosol | 27.29 | 61.5 |
Solyc04g079220.1.1 | Tomato | cytosol | 9.58 | 61.33 |
KRH61261 | Soybean | cytosol, peroxisome, plastid | 27.92 | 59.56 |
HORVU5Hr1G069130.5 | Barley | cytosol | 47.5 | 56.3 |
HORVU1Hr1G069200.2 | Barley | cytosol | 47.5 | 56.16 |
HORVU1Hr1G012140.1 | Barley | plastid | 47.29 | 55.64 |
Solyc02g090490.2.1 | Tomato | extracellular | 47.5 | 55.34 |
PGSC0003DMT400025955 | Potato | extracellular | 47.08 | 54.85 |
PGSC0003DMT400002016 | Potato | cytosol | 29.17 | 54.26 |
Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 46.04 | 53.77 |
Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 45.62 | 53.41 |
PGSC0003DMT400058995 | Potato | cytosol | 17.71 | 53.12 |
HORVU2Hr1G037280.1 | Barley | cytosol | 28.33 | 52.71 |
Solyc02g065090.2.1 | Tomato | nucleus | 45.21 | 51.67 |
HORVU4Hr1G074970.1 | Barley | mitochondrion | 45.42 | 51.66 |
HORVU2Hr1G029000.2 | Barley | cytosol | 43.96 | 51.21 |
HORVU7Hr1G036460.1 | Barley | plasma membrane | 48.75 | 51.2 |
PGSC0003DMT400002019 | Potato | golgi, vacuole | 44.79 | 51.19 |
HORVU3Hr1G101170.1 | Barley | mitochondrion, plastid | 21.25 | 50.75 |
Solyc04g079210.2.1 | Tomato | cytosol | 17.08 | 50.62 |
HORVU4Hr1G050060.10 | Barley | plastid | 26.88 | 50.0 |
HORVU5Hr1G119810.5 | Barley | cytosol | 40.0 | 49.74 |
HORVU5Hr1G119820.1 | Barley | plastid | 40.62 | 49.12 |
HORVU2Hr1G060260.1 | Barley | plastid | 28.12 | 49.09 |
VIT_00s0567g00040.t01 | Wine grape | cytosol | 16.46 | 48.77 |
HORVU4Hr1G019140.24 | Barley | cytosol | 21.04 | 46.54 |
HORVU6Hr1G001990.1 | Barley | cytosol | 29.38 | 31.33 |
HORVU2Hr1G126660.1 | Barley | cytosol, nucleus | 34.17 | 29.13 |
HORVU0Hr1G008670.3 | Barley | cytosol | 18.12 | 21.53 |
HORVU5Hr1G103060.1 | Barley | mitochondrion | 21.04 | 21.26 |
HORVU2Hr1G126570.1 | Barley | extracellular | 15.62 | 21.01 |
HORVU5Hr1G093250.4 | Barley | cytosol | 18.54 | 19.78 |
HORVU5Hr1G011400.6 | Barley | mitochondrion | 16.67 | 17.86 |
HORVU7Hr1G106600.4 | Barley | cytosol | 8.54 | 15.95 |
Protein Annotations
EnsemblPlants:HORVU3Hr1G004220.4 | EnsemblPlantsGene:HORVU3Hr1G004220 | Gene3D:3.40.1090.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:Acyl_Trfase/lysoPLipase |
InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF15 | PFAM:PF01734 | PFscan:PS51635 |
SEG:seg | SUPFAM:SSF52151 | UniParc:UPI000B48354A | UniProt:A0A287JZ78 | MapMan:5.7.2.2.3 | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287JZ78]
Coordinates
chrchr3H:-:11154013..11156104
Molecular Weight (calculated)
52105.2 Da
IEP (calculated)
6.630
GRAVY (calculated)
-0.269
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: PAGSTTFPSD RSYKYGIQAC TSTTINNNAV VTKSAKDNRT SQLIEPTMPP AMQVAEGAGK RSNGPRILMN AAQRVLCRGA SSSLGSPRSP PPSYGSIVTV
101: LSIDGGGVRG IIPGTILAFL EEKLQELDGP EARISDYFDV IAGTSTGGLV TAMLSAPDDA GRPLFAAKDI NQFYLDHCPS IFPQASKGPF GLMRSMMGPK
201: YNGEYLHTIV KKLLGDTRVG DTLNNIVIPT FDIKLLQPTI FSTYNAMKDK SKNALLSDVC ISTSAAPTYL PGHHFQTEGK DGKLRDFNLI DGGVAANNPT
301: LLAMTDVSKQ ILMGNPDFFP IKPADYGKFM ILSLGTGTAK IEEKFDAAEC SKWGLLGWLY NRGATPIIDS FSQASADLVD IHASVLFQAL HCEKRYLRIQ
401: DDELNGETAS VDVSTPENLH RLVDVGKALL KRQVCKVNVE TGKNEPDQNR STNEEELVNF ARMLSEERKA RLRKEGDVEF
101: LSIDGGGVRG IIPGTILAFL EEKLQELDGP EARISDYFDV IAGTSTGGLV TAMLSAPDDA GRPLFAAKDI NQFYLDHCPS IFPQASKGPF GLMRSMMGPK
201: YNGEYLHTIV KKLLGDTRVG DTLNNIVIPT FDIKLLQPTI FSTYNAMKDK SKNALLSDVC ISTSAAPTYL PGHHFQTEGK DGKLRDFNLI DGGVAANNPT
301: LLAMTDVSKQ ILMGNPDFFP IKPADYGKFM ILSLGTGTAK IEEKFDAAEC SKWGLLGWLY NRGATPIIDS FSQASADLVD IHASVLFQAL HCEKRYLRIQ
401: DDELNGETAS VDVSTPENLH RLVDVGKALL KRQVCKVNVE TGKNEPDQNR STNEEELVNF ARMLSEERKA RLRKEGDVEF
001: MENESPSKKN MPPSCGTLVT ILSLDGGGVR GIIAGVILAY LEKQLQELDG EHVRVADYFD VIAGTSTGGL VTAMLTAPDE NGRPRFAAKE IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK
Arabidopsis Description
PLP5PATATIN-like protein 5 [Source:TAIR;Acc:AT4G37060]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.