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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G033500.1 Wheat plastid 86.04 95.38
TraesCS3D01G033200.1 Wheat plastid 86.04 95.38
TraesCS3A01G046500.1 Wheat plastid 85.83 95.15
TraesCS3B01G036800.1 Wheat plastid 84.38 93.32
TraesCS3B01G036100.1 Wheat cytosol 52.5 92.65
TraesCS3D01G033600.1 Wheat mitochondrion, peroxisome 53.75 85.43
HORVU4Hr1G075070.7 Barley plastid 70.21 77.47
Os08t0476900-01 Rice plastid 69.17 77.21
Zm00001d031811_P001 Maize plastid 68.75 75.69
KXG25325 Sorghum plastid 68.12 74.83
Os08t0477100-01 Rice plastid 66.04 73.55
TraesCS3B01G036500.1 Wheat plastid 67.5 72.97
EES15134 Sorghum plastid 65.21 71.95
Zm00001d031813_P001 Maize extracellular 64.79 71.49
HORVU7Hr1G113030.2 Barley plastid 38.54 70.88
HORVU7Hr1G113080.1 Barley cytosol 66.67 68.52
Os08t0376500-00 Rice plastid 36.46 67.31
Os08t0376550-00 Rice cytosol 25.21 66.85
HORVU7Hr1G006840.3 Barley cytosol 40.21 66.55
HORVU6Hr1G027900.2 Barley cytosol 46.25 64.72
VIT_00s0567g00060.t01 Wine grape cytosol 49.38 63.37
VIT_00s0567g00050.t01 Wine grape cytosol 27.29 61.5
Solyc04g079220.1.1 Tomato cytosol 9.58 61.33
KRH61261 Soybean cytosol, peroxisome, plastid 27.92 59.56
HORVU5Hr1G069130.5 Barley cytosol 47.5 56.3
HORVU1Hr1G069200.2 Barley cytosol 47.5 56.16
HORVU1Hr1G012140.1 Barley plastid 47.29 55.64
Solyc02g090490.2.1 Tomato extracellular 47.5 55.34
PGSC0003DMT400025955 Potato extracellular 47.08 54.85
PGSC0003DMT400002016 Potato cytosol 29.17 54.26
Solyc02g065100.1.1 Tomato endoplasmic reticulum, extracellular 46.04 53.77
Solyc03g044710.2.1 Tomato endoplasmic reticulum, golgi, vacuole 45.62 53.41
PGSC0003DMT400058995 Potato cytosol 17.71 53.12
HORVU2Hr1G037280.1 Barley cytosol 28.33 52.71
Solyc02g065090.2.1 Tomato nucleus 45.21 51.67
HORVU4Hr1G074970.1 Barley mitochondrion 45.42 51.66
HORVU2Hr1G029000.2 Barley cytosol 43.96 51.21
HORVU7Hr1G036460.1 Barley plasma membrane 48.75 51.2
PGSC0003DMT400002019 Potato golgi, vacuole 44.79 51.19
HORVU3Hr1G101170.1 Barley mitochondrion, plastid 21.25 50.75
Solyc04g079210.2.1 Tomato cytosol 17.08 50.62
HORVU4Hr1G050060.10 Barley plastid 26.88 50.0
HORVU5Hr1G119810.5 Barley cytosol 40.0 49.74
HORVU5Hr1G119820.1 Barley plastid 40.62 49.12
HORVU2Hr1G060260.1 Barley plastid 28.12 49.09
VIT_00s0567g00040.t01 Wine grape cytosol 16.46 48.77
HORVU4Hr1G019140.24 Barley cytosol 21.04 46.54
HORVU6Hr1G001990.1 Barley cytosol 29.38 31.33
HORVU2Hr1G126660.1 Barley cytosol, nucleus 34.17 29.13
HORVU0Hr1G008670.3 Barley cytosol 18.12 21.53
HORVU5Hr1G103060.1 Barley mitochondrion 21.04 21.26
HORVU2Hr1G126570.1 Barley extracellular 15.62 21.01
HORVU5Hr1G093250.4 Barley cytosol 18.54 19.78
HORVU5Hr1G011400.6 Barley mitochondrion 16.67 17.86
HORVU7Hr1G106600.4 Barley cytosol 8.54 15.95
Protein Annotations
EnsemblPlants:HORVU3Hr1G004220.4EnsemblPlantsGene:HORVU3Hr1G004220Gene3D:3.40.1090.10GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016787InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641InterPro:PNPLA_domPANTHER:PTHR32176PANTHER:PTHR32176:SF15PFAM:PF01734PFscan:PS51635
SEG:segSUPFAM:SSF52151UniParc:UPI000B48354AUniProt:A0A287JZ78MapMan:5.7.2.2.3:
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287JZ78]
Coordinates
chrchr3H:-:11154013..11156104
Molecular Weight (calculated)
52105.2 Da
IEP (calculated)
6.630
GRAVY (calculated)
-0.269
Length
480 amino acids
Sequence
(BLAST)
001: PAGSTTFPSD RSYKYGIQAC TSTTINNNAV VTKSAKDNRT SQLIEPTMPP AMQVAEGAGK RSNGPRILMN AAQRVLCRGA SSSLGSPRSP PPSYGSIVTV
101: LSIDGGGVRG IIPGTILAFL EEKLQELDGP EARISDYFDV IAGTSTGGLV TAMLSAPDDA GRPLFAAKDI NQFYLDHCPS IFPQASKGPF GLMRSMMGPK
201: YNGEYLHTIV KKLLGDTRVG DTLNNIVIPT FDIKLLQPTI FSTYNAMKDK SKNALLSDVC ISTSAAPTYL PGHHFQTEGK DGKLRDFNLI DGGVAANNPT
301: LLAMTDVSKQ ILMGNPDFFP IKPADYGKFM ILSLGTGTAK IEEKFDAAEC SKWGLLGWLY NRGATPIIDS FSQASADLVD IHASVLFQAL HCEKRYLRIQ
401: DDELNGETAS VDVSTPENLH RLVDVGKALL KRQVCKVNVE TGKNEPDQNR STNEEELVNF ARMLSEERKA RLRKEGDVEF
Best Arabidopsis Sequence Match ( AT4G37060.1 )
(BLAST)
001: MENESPSKKN MPPSCGTLVT ILSLDGGGVR GIIAGVILAY LEKQLQELDG EHVRVADYFD VIAGTSTGGL VTAMLTAPDE NGRPRFAAKE IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK
Arabidopsis Description
PLP5PATATIN-like protein 5 [Source:TAIR;Acc:AT4G37060]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.