Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 7
- extracellular 4
- endoplasmic reticulum 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g065090.2.1 | Tomato | nucleus | 94.05 | 94.05 |
| PGSC0003DMT400025955 | Potato | extracellular | 71.9 | 73.3 |
| PGSC0003DMT400058995 | Potato | cytosol | 25.48 | 66.88 |
| PGSC0003DMT400002016 | Potato | cytosol | 40.71 | 66.28 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 32.86 | 64.79 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 56.9 | 63.9 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 23.1 | 59.88 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 30.71 | 54.2 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 27.38 | 53.74 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 41.9 | 53.5 |
| TraesCS7D01G034300.1 | Wheat | mitochondrion | 52.38 | 53.27 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 53.33 | 52.83 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 53.1 | 52.59 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 53.1 | 52.59 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 28.1 | 52.44 |
| PGSC0003DMT400040781 | Potato | cytosol | 49.76 | 52.38 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 50.24 | 52.23 |
| HORVU7Hr1G113030.2 | Barley | plastid | 32.38 | 52.11 |
| Zm00001d031813_P001 | Maize | extracellular | 53.81 | 51.95 |
| KXG25325 | Sorghum | plastid | 54.05 | 51.95 |
| TraesCS7D01G491300.1 | Wheat | plastid | 31.67 | 51.75 |
| TraesCS7D01G491900.1 | Wheat | plastid | 51.9 | 51.66 |
| OQU80645 | Sorghum | cytosol | 49.29 | 51.62 |
| Zm00001d031811_P001 | Maize | plastid | 53.57 | 51.61 |
| TraesCS6B01G170200.1 | Wheat | plastid | 52.14 | 51.53 |
| Os08t0477100-01 | Rice | plastid | 52.86 | 51.51 |
| TraesCS7B01G411200.1 | Wheat | plastid | 51.67 | 51.42 |
| TraesCS4D01G285300.1 | Wheat | plastid | 52.86 | 51.27 |
| TraesCS4A01G017400.1 | Wheat | plastid | 52.86 | 51.27 |
| TraesCS4B01G286600.1 | Wheat | plastid | 52.86 | 51.27 |
| EES15134 | Sorghum | plastid | 53.1 | 51.26 |
| TraesCS7A01G504100.1 | Wheat | plastid | 51.19 | 50.95 |
| TraesCS7B01G411800.1 | Wheat | plastid | 51.9 | 50.93 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 46.67 | 50.78 |
| TraesCS7D01G491200.1 | Wheat | mitochondrion, plastid | 50.95 | 50.71 |
| HORVU4Hr1G075070.7 | Barley | plastid | 52.38 | 50.57 |
| Os08t0477500-01 | Rice | plasma membrane | 32.38 | 50.56 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 30.95 | 50.39 |
| TraesCS2B01G185200.1 | Wheat | cytosol | 48.81 | 50.37 |
| TraesCS7B01G411300.1 | Wheat | mitochondrion | 50.24 | 50.36 |
| TraesCS5D01G528100.1 | Wheat | cytosol | 46.9 | 50.26 |
| TraesCS2D01G166800.1 | Wheat | cytosol | 48.57 | 50.25 |
| TraesCS5B01G529100.1 | Wheat | cytosol | 46.67 | 50.0 |
| TraesCS7A01G504700.1 | Wheat | plastid | 50.24 | 50.0 |
| Os08t0476900-01 | Rice | plastid | 51.19 | 50.0 |
| Os08t0376500-00 | Rice | plastid | 30.95 | 50.0 |
| TraesCS3D01G033200.1 | Wheat | plastid | 51.43 | 49.88 |
| TraesCS3D01G033500.1 | Wheat | plastid | 51.43 | 49.88 |
| TraesCS5B01G529000.1 | Wheat | cytosol | 47.14 | 49.87 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 48.1 | 49.75 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 46.19 | 49.49 |
| TraesCS3A01G046500.1 | Wheat | plastid | 50.95 | 49.42 |
| HORVU5Hr1G119820.1 | Barley | plastid | 46.67 | 49.37 |
| TraesCS3B01G036100.1 | Wheat | cytosol | 31.9 | 49.26 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 46.9 | 49.25 |
| TraesCS3B01G036800.1 | Wheat | plastid | 50.71 | 49.08 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 48.1 | 48.91 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 47.38 | 48.3 |
| Zm00001d031815_P001 | Maize | cytosol | 49.76 | 47.61 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 44.52 | 46.52 |
| PGSC0003DMT400022567 | Potato | extracellular | 38.33 | 46.26 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 51.19 | 46.04 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 45.95 | 45.84 |
| PGSC0003DMT400044046 | Potato | cytosol | 30.0 | 45.82 |
| TraesCS3D01G033600.1 | Wheat | mitochondrion, peroxisome | 32.86 | 45.7 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 31.43 | 45.52 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 37.14 | 45.48 |
| PGSC0003DMT400044057 | Potato | cytosol | 10.24 | 44.79 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 51.19 | 44.79 |
| PGSC0003DMT400040802 | Potato | mitochondrion | 15.95 | 44.67 |
| PGSC0003DMT400044055 | Potato | cytosol | 38.57 | 44.51 |
| Os08t0376550-00 | Rice | cytosol | 19.05 | 44.2 |
| OQU80643 | Sorghum | cytosol | 50.24 | 42.89 |
| PGSC0003DMT400036586 | Potato | cytosol | 22.38 | 40.52 |
| TraesCS3B01G036500.1 | Wheat | plastid | 40.48 | 38.29 |
| OQU83677 | Sorghum | cytosol | 21.9 | 27.63 |
| PGSC0003DMT400033524 | Potato | cytosol | 23.81 | 26.39 |
| PGSC0003DMT400060317 | Potato | cytosol | 29.05 | 26.18 |
| PGSC0003DMT400051868 | Potato | cytosol | 23.33 | 25.65 |
| PGSC0003DMT400060932 | Potato | cytosol | 25.95 | 25.41 |
| PGSC0003DMT400021555 | Potato | cytosol | 24.76 | 23.91 |
Protein Annotations
| EntrezGene:102593947 | Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006629 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016787 | GO:GO:0045735 | InterPro:IPR002641 | UniProt:M0ZJH6 | PFAM:PF01734 | EnsemblPlantsGene:PGSC0003DMG400000766 |
| PGSC:PGSC0003DMG400000766 | EnsemblPlants:PGSC0003DMT400002019 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 |
| SUPFAM:SSF52151 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000296C456 | RefSeq:XP_006360228.1 | SEG:seg |
Description
Patatin 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400000766]
Coordinates
chr2:+:23700207..23702934
Molecular Weight (calculated)
45597.1 Da
IEP (calculated)
9.423
GRAVY (calculated)
-0.056
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIFVAALT LLVTLQVLHI PIAFAATTGK KLTILSIDGG GIRGIIPGTL LAFLESKLQE LDGPNARIAD YFDVVAGTST GGLIATMLTA PNKDNRPLYA
101: AKNITNFYMD HGPKIFPESS RSSFLKRLTN LFGGPKYDGK YLKTLVRSIL GNLTVTQTLT QLVVPSFDIK RLQAVVFTTS DAKAHVSKDA LLSDVCLGTS
201: AAPTYFPVHY FETKDSQGKT RTFDLVDGGV AANNPTLVAI TQTSKEIMLG KLRNANLKPM DCKKMLVLSL GTGIAKDEKK YSAAAASTWG VLGWLYSNGA
301: SPLLDVYGDA SADIVDVHLS TIFQSLESEK NYLRIQDDSL SGEASSMDVA TRKNMEALVQ IGNDRLKKAV SRVNLDTGRY EEVSGEGTNE EALIRFAKLL
401: SEQRKIRQPL DEFSSTRKIL
101: AKNITNFYMD HGPKIFPESS RSSFLKRLTN LFGGPKYDGK YLKTLVRSIL GNLTVTQTLT QLVVPSFDIK RLQAVVFTTS DAKAHVSKDA LLSDVCLGTS
201: AAPTYFPVHY FETKDSQGKT RTFDLVDGGV AANNPTLVAI TQTSKEIMLG KLRNANLKPM DCKKMLVLSL GTGIAKDEKK YSAAAASTWG VLGWLYSNGA
301: SPLLDVYGDA SADIVDVHLS TIFQSLESEK NYLRIQDDSL SGEASSMDVA TRKNMEALVQ IGNDRLKKAV SRVNLDTGRY EEVSGEGTNE EALIRFAKLL
401: SEQRKIRQPL DEFSSTRKIL
001: MENESPSKKN MPPSCGTLVT ILSLDGGGVR GIIAGVILAY LEKQLQELDG EHVRVADYFD VIAGTSTGGL VTAMLTAPDE NGRPRFAAKE IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK
Arabidopsis Description
PLP5PATATIN-like protein 5 [Source:TAIR;Acc:AT4G37060]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.