Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G407800.2 | Wheat | cytosol | 98.6 | 53.83 |
| TraesCS5B01G529100.1 | Wheat | cytosol | 94.86 | 51.79 |
| TraesCS5D01G528100.1 | Wheat | cytosol | 93.46 | 51.02 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 89.72 | 49.74 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 78.04 | 41.54 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 73.83 | 38.92 |
| Solyc04g079210.2.1 | Tomato | cytosol | 28.04 | 37.04 |
| OQU80645 | Sorghum | cytosol | 69.16 | 36.91 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 27.57 | 36.42 |
| PGSC0003DMT400058995 | Potato | cytosol | 27.1 | 36.25 |
| Zm00001d031815_P001 | Maize | cytosol | 69.16 | 33.71 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 64.02 | 32.54 |
| OQU80643 | Sorghum | cytosol | 68.22 | 29.67 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 32.71 | 29.41 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 50.47 | 28.88 |
| Solyc02g065090.2.1 | Tomato | nucleus | 54.21 | 27.62 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 53.74 | 27.38 |
| TraesCS7A01G177300.1 | Wheat | cytosol | 50.93 | 26.72 |
| TraesCS5A01G243200.1 | Wheat | cytosol | 50.47 | 26.67 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 50.47 | 26.6 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 50.93 | 26.59 |
| TraesCS1A01G059100.1 | Wheat | cytosol | 50.47 | 26.41 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 50.47 | 26.28 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.6 | 25.74 |
| PGSC0003DMT400025955 | Potato | extracellular | 49.53 | 25.73 |
| Solyc02g090490.2.1 | Tomato | extracellular | 49.53 | 25.73 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 49.53 | 25.67 |
| TraesCS7A01G504100.1 | Wheat | plastid | 50.47 | 25.59 |
| TraesCS4A01G018100.1 | Wheat | cytosol | 50.0 | 25.36 |
| TraesCS3A01G046500.1 | Wheat | plastid | 50.93 | 25.17 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 49.53 | 25.0 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 49.07 | 24.76 |
| TraesCS4A01G017400.1 | Wheat | plastid | 50.0 | 24.71 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 48.13 | 24.29 |
| TraesCS7A01G504700.1 | Wheat | plastid | 47.2 | 23.93 |
| Os08t0477500-01 | Rice | plasma membrane | 28.97 | 23.05 |
| PGSC0003DMT400002016 | Potato | cytosol | 27.1 | 22.48 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 23.36 | 22.22 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 21.96 | 22.07 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 29.44 | 19.15 |
| TraesCS6A01G004800.1 | Wheat | cytosol | 36.92 | 17.59 |
| TraesCS7A01G012900.1 | Wheat | cytosol | 41.12 | 16.03 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 27.57 | 14.79 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 28.5 | 13.83 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 25.23 | 13.2 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 27.1 | 12.55 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 24.3 | 10.77 |
| Solyc04g079220.1.1 | Tomato | cytosol | 0.47 | 1.33 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G345400.1 | EnsemblPlantsGene:TraesCS4A01G345400 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF7 | PFAM:PF01734 |
| PFscan:PS51635 | SUPFAM:SSF52151 | TMHMM:TMhelix | MapMan:5.7.2.2.3 | : | : |
Description
No Description!
Coordinates
chr4A:+:624925474..624926539
Molecular Weight (calculated)
22621.1 Da
IEP (calculated)
5.374
GRAVY (calculated)
-0.108
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGSSATAG DEAKVITILS IDGGGVRGII PAIVLAFLEK ELQKLDGPDA RIADYFDVVA GTSTGGLLTV MLAAPDKDGL PKLKYSAKDA AKWGILSWLI
101: KDGSVPILDM FNAGSADMVD FHLSVLSAVL GTSHQYLRIQ YDKLSGSAGS IDDSSKANLD RLVKIGEELL SEKVSGVDLE TGRNVEVPGG GTNAEELAKY
201: AKQLSDKRRK RRNN
101: KDGSVPILDM FNAGSADMVD FHLSVLSAVL GTSHQYLRIQ YDKLSGSAGS IDDSSKANLD RLVKIGEELL SEKVSGVDLE TGRNVEVPGG GTNAEELAKY
201: AKQLSDKRRK RRNN
001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
Arabidopsis Description
PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.