Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G529000.1 | Wheat | cytosol | 91.54 | 92.7 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 91.29 | 91.75 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 53.73 | 90.76 |
| HORVU5Hr1G119820.1 | Barley | plastid | 82.34 | 83.38 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 41.54 | 78.04 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 75.37 | 77.3 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 71.14 | 70.44 |
| OQU80645 | Sorghum | cytosol | 66.67 | 66.83 |
| Zm00001d031815_P001 | Maize | cytosol | 67.16 | 61.5 |
| Os08t0477500-01 | Rice | plasma membrane | 41.04 | 61.34 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 29.85 | 56.34 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 58.21 | 55.58 |
| Solyc04g079220.1.1 | Tomato | cytosol | 9.95 | 53.33 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 29.6 | 52.89 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 49.01 | 52.67 |
| OQU80643 | Sorghum | cytosol | 62.94 | 51.42 |
| TraesCS5A01G243200.1 | Wheat | cytosol | 49.01 | 48.64 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.01 | 47.77 |
| TraesCS7A01G177300.1 | Wheat | cytosol | 47.01 | 46.32 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 46.52 | 46.06 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 46.52 | 45.61 |
| TraesCS1A01G059100.1 | Wheat | cytosol | 46.27 | 45.48 |
| TraesCS7A01G504700.1 | Wheat | plastid | 47.51 | 45.26 |
| TraesCS7A01G504100.1 | Wheat | plastid | 47.51 | 45.26 |
| Solyc02g090490.2.1 | Tomato | extracellular | 46.02 | 44.9 |
| Solyc02g065090.2.1 | Tomato | nucleus | 46.77 | 44.76 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 47.01 | 44.58 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 47.01 | 44.58 |
| TraesCS4A01G017400.1 | Wheat | plastid | 48.01 | 44.57 |
| TraesCS4A01G018100.1 | Wheat | cytosol | 46.77 | 44.55 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 45.52 | 44.53 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 46.52 | 44.52 |
| PGSC0003DMT400025955 | Potato | extracellular | 45.52 | 44.42 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 36.32 | 44.38 |
| PGSC0003DMT400002016 | Potato | cytosol | 28.36 | 44.19 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 46.02 | 43.63 |
| TraesCS3A01G046500.1 | Wheat | plastid | 46.77 | 43.42 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 44.28 | 43.1 |
| Solyc04g079210.2.1 | Tomato | cytosol | 16.67 | 41.36 |
| PGSC0003DMT400058995 | Potato | cytosol | 16.17 | 40.62 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 15.67 | 38.89 |
| TraesCS6A01G004800.1 | Wheat | cytosol | 32.84 | 29.4 |
| TraesCS7A01G012900.1 | Wheat | cytosol | 38.56 | 28.23 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 23.88 | 24.06 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 25.37 | 23.13 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 24.38 | 21.21 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 21.14 | 20.78 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 23.13 | 19.25 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G345300.1 | EnsemblPlantsGene:TraesCS4A01G345300 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF7 | PFAM:PF01734 |
| PFscan:PS51635 | SUPFAM:SSF52151 | MapMan:5.7.2.2.3 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:624919171..624921754
Molecular Weight (calculated)
42776.1 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.066
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSAGG DKVNKLVTIL SIDGGGVRGI IPATVLAFLE KELQKLDGPD ARIADYFDVV AGTSTGGLLT VMLTAPDKDG RPLFDAKDLA KDSIFSKIGT
101: ALGMVTGPKY NGKYLQSLLR RHLGDTKLDG ALTSVVIPAF DITHLQPTIF SSYHQLKNQP AKNALLSDIA IGTSAAPTFF PAHYFETEDG KGGTRAFNLI
201: DGGVAANNPT LCAMSHVAED IIVAGNGDLL GKSYMVISIG CGTSSNPKGK YSAKDTAQWG ILDWILKGST VPILDMFNAA SGDMVDIHLS ILSAALGSSH
301: QYLRIQSTAW PLHQLMYTTI ICYGQLSGSA GSIDDCSKAN LDKLVEIGNE LLGKKVSQVD LETCQNVEVP DEGTNAEQLA KFAKQLSHER RRRHNELATT
401: QT
101: ALGMVTGPKY NGKYLQSLLR RHLGDTKLDG ALTSVVIPAF DITHLQPTIF SSYHQLKNQP AKNALLSDIA IGTSAAPTFF PAHYFETEDG KGGTRAFNLI
201: DGGVAANNPT LCAMSHVAED IIVAGNGDLL GKSYMVISIG CGTSSNPKGK YSAKDTAQWG ILDWILKGST VPILDMFNAA SGDMVDIHLS ILSAALGSSH
301: QYLRIQSTAW PLHQLMYTTI ICYGQLSGSA GSIDDCSKAN LDKLVEIGNE LLGKKVSQVD LETCQNVEVP DEGTNAEQLA KFAKQLSHER RRRHNELATT
401: QT
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [extracellular,cytosol,peroxisome,golgi,plasma membrane,vacuole,endoplasmic reticulum,plastid]
SUBAcon: [extracellular,cytosol,peroxisome,golgi,plasma membrane,vacuole,endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.