Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G077500.1 | Wheat | cytosol, peroxisome, plastid | 96.82 | 97.06 |
| TraesCS1D01G060500.1 | Wheat | cytosol | 96.09 | 95.62 |
| HORVU1Hr1G012140.1 | Barley | plastid | 90.22 | 90.44 |
| TraesCS7A01G177300.1 | Wheat | cytosol | 89.98 | 90.2 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 87.78 | 88.42 |
| EES08841 | Sorghum | cytosol | 79.46 | 78.69 |
| EES08840 | Sorghum | cytosol | 77.02 | 77.78 |
| Zm00001d007604_P001 | Maize | cytosol, peroxisome, plastid | 76.77 | 77.15 |
| Zm00001d007620_P001 | Maize | cytosol, peroxisome, plastid | 76.53 | 76.9 |
| Zm00001d007616_P001 | Maize | cytosol, peroxisome, plastid | 76.53 | 76.9 |
| EES10106 | Sorghum | plastid | 77.02 | 76.83 |
| Zm00001d007618_P001 | Maize | mitochondrion | 76.04 | 76.41 |
| Os11t0614400-01 | Rice | plasma membrane | 77.75 | 76.26 |
| Zm00001d048841_P001 | Maize | mitochondrion, plasma membrane | 75.55 | 75.37 |
| Zm00001d007623_P002 | Maize | mitochondrion | 76.53 | 74.88 |
| Os11t0614500-02 | Rice | cytosol | 42.05 | 70.2 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 44.01 | 54.71 |
| TraesCS5A01G243200.1 | Wheat | cytosol | 53.55 | 54.07 |
| TraesCS4A01G017400.1 | Wheat | plastid | 56.72 | 53.58 |
| TraesCS1A01G407900.1 | Wheat | cytosol | 31.05 | 53.36 |
| TraesCS7A01G504100.1 | Wheat | plastid | 54.77 | 53.08 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 55.01 | 53.07 |
| TraesCS3A01G046500.1 | Wheat | plastid | 55.99 | 52.89 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 54.77 | 52.83 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 54.77 | 52.83 |
| TraesCS7A01G504700.1 | Wheat | plastid | 54.28 | 52.61 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 51.83 | 52.48 |
| TraesCS4A01G018100.1 | Wheat | cytosol | 54.03 | 52.37 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 50.37 | 50.74 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 26.41 | 50.47 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 50.86 | 50.36 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 46.7 | 48.72 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 45.48 | 46.27 |
| TraesCS6A01G004800.1 | Wheat | cytosol | 44.5 | 40.53 |
| TraesCS7A01G012900.1 | Wheat | cytosol | 41.08 | 30.6 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 22.98 | 23.56 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 24.94 | 22.08 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 23.47 | 21.77 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 20.05 | 20.05 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 22.49 | 19.05 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G059100.1 | EnsemblPlantsGene:TraesCS1A01G059100 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | ncoils:Coil | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF10 |
| PFAM:PF01734 | PFscan:PS51635 | SEG:seg | SUPFAM:SSF52151 | TIGR:cd07214 | MapMan:5.7.2.2.3 |
Description
No Description!
Coordinates
chr1A:-:39870731..39872140
Molecular Weight (calculated)
44930.9 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.223
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSHAEPTTT CVTCPPPSQG RLITVLSIDG GGIRGLIPST ILACLESKLQ ELDGPDARIA DYFDVIAGTS TGALVTSMLA APGENKRPLF EAKEINKFYL
101: DNGPKIFPQR SWGLLTPIGN MFGAVMGPKY DGKFLHDKIK SLTNDVTVAD TVTNIIVPTF DIKYLQPIIF NTYEAKVDPL KNAHLSDICI STSAAPTYFP
201: AHYFTTRDPT GKQPDREYHL IDGGVAANNP TMAAMSMITK EVLRRNPDFT HGKPTEYNNY LIISIGTGSA KMAEKYTAPD CAKWGVLRWL YDGGFTPLID
301: IFSHASADMV DIHAAVLFQA LRIEKNYLRI QDDSLTGHTS SVDIATKENM EALIGIGKNL LKKNVSRVNI DTGMYESVEG EGTNEEALAR FARKLSKERK
401: LRQTNLNSQ
101: DNGPKIFPQR SWGLLTPIGN MFGAVMGPKY DGKFLHDKIK SLTNDVTVAD TVTNIIVPTF DIKYLQPIIF NTYEAKVDPL KNAHLSDICI STSAAPTYFP
201: AHYFTTRDPT GKQPDREYHL IDGGVAANNP TMAAMSMITK EVLRRNPDFT HGKPTEYNNY LIISIGTGSA KMAEKYTAPD CAKWGVLRWL YDGGFTPLID
301: IFSHASADMV DIHAAVLFQA LRIEKNYLRI QDDSLTGHTS SVDIATKENM EALIGIGKNL LKKNVSRVNI DTGMYESVEG EGTNEEALAR FARKLSKERK
401: LRQTNLNSQ
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.