Factsheet for Zm00001d048841_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10106	Sorghum	plastid	90.98	90.98
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	89.27	89.93
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	89.27	89.93
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	89.02	89.68
Zm00001d007618_P001	Maize	mitochondrion	88.78	89.43
Zm00001d007623_P002	Maize	mitochondrion	89.02	87.32
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	75.37	75.74
TraesCS1A01G059100.1	Wheat	cytosol	75.37	75.55
TraesCS1D01G060500.1	Wheat	cytosol	75.61	75.43
TraesCS7A01G177300.1	Wheat	cytosol	74.39	74.75
TraesCS7B01G082400.1	Wheat	cytosol	74.15	74.51
TraesCS7D01G178600.1	Wheat	cytosol	74.15	74.51
TraesCS1B01G313800.1	Wheat	cytosol	73.66	74.38
TraesCS1D01G302900.1	Wheat	cytosol	73.41	74.32
TraesCS1A01G303400.1	Wheat	cytosol	73.17	73.89
HORVU1Hr1G012140.1	Barley	plastid	72.93	73.28
HORVU1Hr1G069200.2	Barley	cytosol	72.44	73.15
Os11t0614400-01	Rice	plasma membrane	73.9	72.66
Os11t0614500-02	Rice	cytosol	43.17	72.24
HORVU7Hr1G036460.1	Barley	plasma membrane	74.39	66.74
Zm00001d005911_P001	Maize	cytosol	52.68	53.73
Zm00001d031811_P001	Maize	plastid	53.66	50.46
Zm00001d031815_P001	Maize	cytosol	53.41	49.89
Zm00001d029412_P001	Maize	mitochondrion	51.71	49.53
Zm00001d031813_P001	Maize	extracellular	52.2	49.2
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	48.29	47.03
Zm00001d042504_P002	Maize	cytosol	45.61	44.42
Zm00001d042041_P001	Maize	cytosol	39.51	42.74
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	47.56	38.31
Zm00001d034340_P001	Maize	cytosol	23.66	22.15
Zm00001d028482_P001	Maize	cytosol	23.9	21.3
Zm00001d018788_P001	Maize	nucleus	24.15	21.24
Zm00001d033254_P001	Maize	cytosol	21.46	20.51
Zm00001d014386_P001	Maize	cytosol, plastid	20.0	20.1
Zm00001d033256_P001	Maize	cytosol	20.73	19.19
Zm00001d041481_P001	Maize	cytosol	20.73	18.72
Zm00001d000203_P001	Maize	cytosol	19.51	17.98
Zm00001d031053_P001	Maize	plastid	20.73	15.21

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	ProteinID:AQK49036.1	InterPro:Acyl_Trfase/lysoPLipase	EMBL:BT060501	UniProt:C0HDU5
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635
PANTHER:PTHR32176	PANTHER:PTHR32176:SF10	SUPFAM:SSF52151	UniParc:UPI000003EF83	EnsemblPlantsGene:Zm00001d048841	EnsemblPlants:Zm00001d048841_P001
EnsemblPlants:Zm00001d048841_T001	SEG:seg	:	:	:	:

Description

Patatin-like protein 2

Coordinates

chr4:+:6223611..6225506

Molecular Weight (calculated)

44454.0 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.167

Length

410 amino acids

Sequence
(BLAST)

001: MGSIGRGTAN CATVPQPPPS TGKLITILSI DGGGIRGLIP ATIIAYLEAK LQELDGPDAR IADYFDVIAG TSTGALLASM LAAPDENNRP LFAAKDLTTF
101: YLENGPKIFP QKKAGLLTPL RNLLGLVRGP KYDGVFLHDK IKSLTHDVRV ADTVTNVIVP AFDVKSLQPI IFSTYEAKTD TLKNAHLSDI CISTSAAPTY
201: FPAHFFKTEA TDGRPPREYH LVDGGVAANN PTMVAMSMLT KEVHRRNPNF NAGSPTEYTN YLIISVGTGS AKQAEKYTAE QCAKWGLIQW LYNGGFTPII
301: DIFSHASSDM VDIHASILFQ ALHCEKKYLR IQDDTLTGNA SSVDIATKEN MESLISIGQE LLNKPVARVN IDTGLYESCE GEGTNAQSLA DFAKQLSDER
401: KLRKSNLNSN

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.